| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3322 |
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| Symbol | |
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| ID | 4032777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3665062 |
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| End bp | 3667293 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971732 |
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| Product | Phage tail tape measure protein TP901, core region |
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| Protein accession | YP_578514 |
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| Protein GI | 92118785 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.787637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACTC TCACCTCCAA GCTCATCGTT GAGCTGATCG ACCGGGCGTC GGCGCCATCG
CGCGCCATCG CCGGGGCGGT CAATCGGTTG ACAGCGATGC AGTCGCGCAA CGCCGCGGCG
CTGGCGTCGG CGCAGACGCA GATGTTTGGC GCGGTGGCCG TTGCCTATGG CTTGGCGAAG
GCGATCGGAG CGCCAATCAA GGCGGCGGTC GATTTCGAGA CCAAGCTGGA AGACATCGGG
CAGAAGATCA ACGCACCGGT CTCCGAGCTT CCAAAACTGG GCGAGGAGCT GCGCGCCGTG
GCGCGTCAGA CGACGCAGAC GGCGTCGCAG ATGGCCGAAG GCATGGACGT GCTCGCCGGC
ATGGGTGCGA ACCGTGAAGA TGCGCTCGGC CTGCTGCCGG CGATCGGCAG GGCCGCGACG
GCGTATAATG CGGACGTGAA GGAATTGTCA CAGGCCGGCT ATGCCGCGCT CGATAATCTG
AAAGTGCCGG CCGATCAGTT CGCGCGCGCG CTTGACGCCA TGGCGCAAGC CGGCAAGGCT
GGTGCCTTCG AACTGAAGGA TATGGCGAGA TATTTTCCGG GGCTCGGCGC TGCCTATCAG
GGCCTCAAGC AATCCGGCGT GCCGGCCGTC GCCGATCTGG CGGCCGCGCT GCAGATCGTG
CGGAAGGGCA CCGGCGAAAG CGCAGAGGCC GCGACGAATC TGCAGAACGT TCTGCAAAAG
ATCAACTCAC CGCTGACCCG CAAGAATTTC GAGAAAATGG GCGTTAATCT CGAAAAGGAG
ATGGCGCGAG CGGCGAAGGC CGGCGCCACG CCGATCGAGG CGATCGCGGT GCTGACGAAT
AAAGTGCTGA AGGGCAACCT CGGGCGGCTT GGTGATCTGT TCAACGATTC TGAAGTTCAG
AAGGCGTTGC GACCGTTGAT TCAGAACATC GATGAGTATC GGCGCATTCG GAAAGAGGCA
CTGGCGGCGC AGGGTGTGGT CGAGGAAGAT TATCAGCGGC GGCTGAAAAC GGGCGCGGCG
GCGGTCCAGC GGTTTCGGAT CGCGATTGAA AATATCAACC TGGCGGTCGG CGCAGCGCTG
TTGCCCGGCC TAACCACGTT GGCCGATGCC CTGGTGCCGA TCTCCAACCG CATGGCAGCG
TTCGGCGAGA AACACCCGGC AGTGACGCGC GCTGTGGTGG CGACCGCTGC GGGGCTGATC
GGACTGCGCA TCGCCGGCTT CGCGGCCGCG TTCGGTCTCC GGTGGATGTG GGGCGGAGCA
TTGGCCGTTG GCATTGCCAG CATGAAGGCG CTGGGCGTCG CGGTAAAGGT GGCGTCGGTC
GCGCTCTGGC CCTTCGGCGC AGCCTTCCGG GCTGCGCGTT CTGCGATACT GGCGACACGC
GCAGCCATTC TGGCATTTGC GGTATCCGCA GCGATGCTGG GCACTGGCGG CGCTCTTAGG
GCTGCAGCGG CGTCCATTTT CAGCATGGCG ACTGCCATGC GGGTGCTCAA GTTCGCCGTG
ATCGGTACCG GAATCGGCGC CGCTTTGGTT GGCCTCGCCG CAATCGGAAT GGCCGTCTAC
AATAATTGGG CGGGCATAAA GGCGCTATTT GTCGGCATTG GCGAGGGCCT TATGGCTGGA
CTTGCGCCGG TGATGCCGAC AATCCAGCCC ATCATCGATG GCTTCAATTG GTTGTCAAAC
ACCCTGTCGT CGATATTCGA GCCGATCGAT GCATCGAAGG AAGGCTGGCG GTCGCTTGGC
GTCACGATCG GCACCAGTAT TGGCGGCGCG ATCACCAGCG TGATCGAGAA AATCAAATCG
TTGATCGGGT GGATCACGTC GGTGCCCGGC AAGATTGCCG GCATGTTGGG CTTTGGCGGC
TCTGGTAAGA CGCCTGCTGG TGCGGCCGCG ACCGTGGCCG CACCCGTCAT CGCCGGCACT
CGTGCGGCCG GCGGGCCGGT GAGGGCGGGC AGCACCTATC TCGTCGGCGA GAACGGTCCC
GAGCTTTTCC GGGCGCGGGC AAGTGGCGCG ATCTCCAACA CGCTCGACAC CGTGCGGGCC
ATCAAGGCGC AGGCCATGGC TGGCGCGGTG AAGGCAGGCG GTGGCGGTGC GACGGTCACC
AACACCGTCA CAATCCATGT GCAGGCAGCG CCGGGTCAGT CGCCCGAGGC AATCGCCTCA
GCCGTCGAGA AACAGCTTAG TTCAAAGCTG AATGCGCTCT CGCGTGGCGC CTATAGCGAC
GGGGTGTATT GA
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| Protein sequence | MATLTSKLIV ELIDRASAPS RAIAGAVNRL TAMQSRNAAA LASAQTQMFG AVAVAYGLAK
AIGAPIKAAV DFETKLEDIG QKINAPVSEL PKLGEELRAV ARQTTQTASQ MAEGMDVLAG
MGANREDALG LLPAIGRAAT AYNADVKELS QAGYAALDNL KVPADQFARA LDAMAQAGKA
GAFELKDMAR YFPGLGAAYQ GLKQSGVPAV ADLAAALQIV RKGTGESAEA ATNLQNVLQK
INSPLTRKNF EKMGVNLEKE MARAAKAGAT PIEAIAVLTN KVLKGNLGRL GDLFNDSEVQ
KALRPLIQNI DEYRRIRKEA LAAQGVVEED YQRRLKTGAA AVQRFRIAIE NINLAVGAAL
LPGLTTLADA LVPISNRMAA FGEKHPAVTR AVVATAAGLI GLRIAGFAAA FGLRWMWGGA
LAVGIASMKA LGVAVKVASV ALWPFGAAFR AARSAILATR AAILAFAVSA AMLGTGGALR
AAAASIFSMA TAMRVLKFAV IGTGIGAALV GLAAIGMAVY NNWAGIKALF VGIGEGLMAG
LAPVMPTIQP IIDGFNWLSN TLSSIFEPID ASKEGWRSLG VTIGTSIGGA ITSVIEKIKS
LIGWITSVPG KIAGMLGFGG SGKTPAGAAA TVAAPVIAGT RAAGGPVRAG STYLVGENGP
ELFRARASGA ISNTLDTVRA IKAQAMAGAV KAGGGGATVT NTVTIHVQAA PGQSPEAIAS
AVEKQLSSKL NALSRGAYSD GVY
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