| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0190 |
|---|
| Symbol | |
|---|
| ID | 6089761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 240950 |
|---|
| End bp | 243157 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641595250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001718956 |
|---|
| Protein GI | 170022451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA ACTTACAACT GGCGTTGACC CTTTTTGCCA AAGATACTGC GTCAAAAGTC
CTGCGCAAAA CGATGCAGGA TACAATAAAT CAGAGTAAAT CTGTCGCAAA AGCTGACAAT
CAGCTTGGCA AATCCCAGAA ACAAAGCGCC GATACCGCCA TTCGATCATC GAAGTCACTC
CAGTCAGAAT GGCAGCGCGC CAGTAATGCG CGCTCTACGC TTGGAATTCG CTCTGAACGT
GATATTCAGC GTGAAATTCA GCTCACTCAG GCCGCCTATA ATCGCCTGAC CCGCACTGGT
ACACTCTCGG CAAATGAACA ATCTCGCGCC TTTGCGTCAA TGTCAGAGCG CGTCAGTAAA
TTGCGTGGTG AACTCAGTGG CGCAAGCCAG TCACTGTCGC GGTTCGAACG AGCAAAAGGC
ATTGGCTCAA ATGCGATGGC GATAGCGGGC GGTGTAGCAG CGATGGGAGC CGTTCTGGCA
CAGCCGGTTC GTAACCAGAT GAGTTATGAT AGTCGCGTGG CAATGATGGC TAATACGGCA
TATGCAGAGC GAGGTGTTGA GGGCCGCATT GAGGGTAAAA AAGAACTCTC CGGCGCTATC
AAGAATGCAG TAACTATTGG TGGTGGTACG AAGGAGTCAG CCGCTGATAC ATTGGATAAA
CTGCTTGCCT CGGGTGCAGT TGATATGGAC TCAGCGAAAA CCTTGTTACC TGTAATTCAG
AAATATGCTA CAGCAACCGG CGCTGATCCC ACGGACCTGG CTAACATCGT GATTTCTTTA
AAGCGTTCTT TTGGCATTCA GAATAAAGAT GTTGAAAAAG CGTTAAACAT GAGCATTGTC
GGTGGACAAG AGGGTTCTTA TGAACTTGCC GACATGGCAA AAGCATTGCC TGAACAACTC
GCCCTCGCCA AAAGCTTGGG TATGAGTGGC CTGGACGATT ATGCAACATT GCTGGGTGTC
AATCAGGGAG CAGCAACAAC TGCGGGTACC AGCAGTCAGG CAGGTACAAA TGTTATTAAT
TTATTAGCAA AGATTAATAG CAAGGACGCT GCCAGAGCCG CCGCACGAGT GGAGTACAAT
GGCAAAGGGA TCGACTTACC GGGCAGTCTT GCCGCAGCCA AAGAAAAGGG CATAAATCCA
ATTGATGCAT TTATGGGGAT TGTCGATAAA GTTGTCGCTA ATGACCCGGC TTATCAAAAG
CTGGAAGCAA AACTTAAAAC TGCTAAAGGT GAAGATAGAA AGCAAGTCCT AGAGTCAATG
TCAAAAATCC TGGAAGGTTC GGCTATTGGT TCAATCATTG CAGACCAGCA GGCGCTTCTT
GGGTTGCTCG GGTATCGGGG AAATAAAGAA TATGTTCAAG GTGTTATTAA GAAAAGTAAT
GAGCAGCGAG AATTAAGGCC TGGGGAAGGA GCAGGTGATA TCAATTTCGC CGTCATATCT
GATACGCCAG ATTTCAAAAC AGACCAGCTA AAAAACGTTC GCGACTTCGC TGAAATGGAT
TCAATTAAAC CCCTCTCAGA TGTGCTGGGC CGACTTTCAA AAGAATTAAC CGACTACGCT
GAGCAGTATC CTGGATTGAC TGTCGCTGTA TCCGGCGCGA CTACCGGTAT CAAAGCGCTC
GCAGCAGGGG CCGCCGCTGT CGCAGGTATT CGTATCCTGA CAGGCGGCGG CATTCCCGGC
ATCAGTAAGA AAGGCGGCTC ATTCAACCCG ACAGATATCT TATCAGGGGA CAACTCTAAT
TCCGGTGTCG TGCCAGTGTA TGTCACTAAC TGGCAAGATA TTGGTGAAAA AAATAAACTC
GTTGACGCAT TCAAAGATTT ACCTGGTGCC GTTGGTAAAT TCGCCAGCTA TGTAAATGTT
GTAACAGCAT TGAAAGAATC TTTTGATGAG CGGCGTAAAC AGAATCAAAA AGAGGCTGAT
GAAAAAGGCG TCAATGTCGG TGAATATTTG ATTAGTAAAA GGGCTAATCA AAAGCCTCTG
TTTGATTTTG ACCCGGCGTC CTGGTGGAGT AAGCCTTCAA CAATCGGCAA TGGAGATAAT
CCAGATAGTT TCGGTGTACC AGCATATATG AAGTCCACTC AGCAGCAAGG CTACCCATCA
ATCCCTATTC AGATCCAGAA TCGCATGGAG CTGGACGGAA AAGTCCTTGC AGAGTCAACA
AATGAAGTGA ATGCCGCGCA AGCTAATCGC GGTTCGACGG GAGGCTAG
|
|---|
| Protein sequence | MARNLQLALT LFAKDTASKV LRKTMQDTIN QSKSVAKADN QLGKSQKQSA DTAIRSSKSL
QSEWQRASNA RSTLGIRSER DIQREIQLTQ AAYNRLTRTG TLSANEQSRA FASMSERVSK
LRGELSGASQ SLSRFERAKG IGSNAMAIAG GVAAMGAVLA QPVRNQMSYD SRVAMMANTA
YAERGVEGRI EGKKELSGAI KNAVTIGGGT KESAADTLDK LLASGAVDMD SAKTLLPVIQ
KYATATGADP TDLANIVISL KRSFGIQNKD VEKALNMSIV GGQEGSYELA DMAKALPEQL
ALAKSLGMSG LDDYATLLGV NQGAATTAGT SSQAGTNVIN LLAKINSKDA ARAAARVEYN
GKGIDLPGSL AAAKEKGINP IDAFMGIVDK VVANDPAYQK LEAKLKTAKG EDRKQVLESM
SKILEGSAIG SIIADQQALL GLLGYRGNKE YVQGVIKKSN EQRELRPGEG AGDINFAVIS
DTPDFKTDQL KNVRDFAEMD SIKPLSDVLG RLSKELTDYA EQYPGLTVAV SGATTGIKAL
AAGAAAVAGI RILTGGGIPG ISKKGGSFNP TDILSGDNSN SGVVPVYVTN WQDIGEKNKL
VDAFKDLPGA VGKFASYVNV VTALKESFDE RRKQNQKEAD EKGVNVGEYL ISKRANQKPL
FDFDPASWWS KPSTIGNGDN PDSFGVPAYM KSTQQQGYPS IPIQIQNRME LDGKVLAEST
NEVNAAQANR GSTGG
|
|---|
| |