| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1857 |
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| Symbol | |
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| ID | 4310078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2038128 |
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| End bp | 2040572 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149671 |
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| Product | pyocin R2_PP, tail length determination protein, putative |
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| Protein accession | YP_773747 |
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| Protein GI | 115351908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAG ACTTAGCGCT TGGCATCGTG ATCGGCGGGG CTGTGTCGGC GACGTTCGGC
AAGGCGATTA CCGACACGTC GTCGAAGATC GATGCGATGA AAAAGCGGGC GAACGACTCG
CGGCTCTGGC AGCGCCAGAT CGGCGAGACG ATGCGTCTGC AGGACGAGTT CCGCCGATTG
CACCTGGCGG GCGATAGCGC GGCGGACGGC ATCCGTCGCA AGCTCGACAG CAATCTGAAA
TCGTTGCGGG ACGCCGGCAT CGAGGTCGAC CGGCTCGATC GAGCGTACGC GCGGCTCGGC
CGGACGACGC GCGGGCTGGA TCTGAAGGCG TCCGGTTACG AGCGGCTGAC CGCTGGTCGG
GAGGCGGGAC GCGGCGTGAT CGGTGATGCC GTGAAGCTGA CCGCCTCGGT CGCGGTGCCG
GCGACGATCG CGGCGAACTA TCAGGCGATC ATTCGCGACA TCGCGATCAA GGCCGGCATA
GCGCGCACGC AGGAAGAAGC GGCGATGGGC TCGCGTATTC GACGCGACGC CGGGGCGAAC
GGCATCGGCC GCAATGACCT GGCTGATGCC GTCAACCAGA TGGTTGCGGG CGGGATGGAT
CTCAATCGCG CGCTCAACTT CGCGCCGCTG GTTGCGAAGT TTTCGATCGG CCAAGGTGCG
ACGACGGTCG AGACCGCGAA GATGATCCAA GCGCTGCAGC AGAACGCGGA GATCGTCGAC
CCGCGTCAGA TGGCGAAGGC GCTCGAAGCG ATCGCCTATC TCGGCAAGGA AGGGTCGTTC
GAGTCCGTCG ACATGGCGCG GTGGTTCCCG GTGCTACTCG CCGAAATGAA GAAGATCGGC
ATCACGGGGC AGGACTCGGT GACGCAGCTC GGGGCCATGC TCCAGGTGCA GATGAAGACC
GCCGGTAGTT CGGACGAAGC CGCGAACAAC CTGAAAAACT GGTTCTCGAA GATCGGCTCC
GGCGAAACCG AACGCAACTA TGCGAAGGCC GGCGTCGACT ATCAGGCCAA GATGCGCGAG
GCGATCGGCA AAGGCTGGTC AACGCTGGAA GCGTCGTTCG TACTTGCCCG CGCTTACATC
GAGCGCGTCG ATCCCGCCAA GGCGAAGCAG CTCGCGTCGG CGGCGAAGCA GTTCAATTCG
GAGATGGACC CGGCCAAGCG TCAGGCGCAG ATGGCCGCGT TCGCCGAGAC GATGAAGACC
GGCGACCTGT TCAACGACAT GCAGGTCAAG GCGGCGCTGA CGGCATACAT GCAAAACGCC
GAGCTGTACA CGAACCTGAA GCGCAACGCG CAGGACGCGA GCGGCGAGAT CCAGAAGGAT
CTCGAAGCAC GTCGCGAGAC GTCAAAGCAG ATCTGGAGTG AGGTCGGGCA GCGGTGGGAC
GACGCGATGC GCAGCATTGG CGACGCCCTG CGTCCGATCA CGGATCGTAT CGGCGAGGGG
GCGAAAGGTC TCGGCAGCGG TATCCAGTCC GTTGCGGATG CTGCGCCGAA GGCGACGGCA
GCCGTCGTCG GCATCGCGGG CGCGGCGCTT GCGTTTCGTG GGGCGAGGGC ACTTTGGAGC
ATTGGACGCG GCGCATTCGA CATCGCGCGC GGCACCGTGC TTGCGCGCGG CGGTCGAGCT
GCAGCGGGTG GGTCACGTGC CGCCGGTGGC GTCGTCGGCC GGGCACTCGA TGCGCTCGGC
GGAGCTGCAG CGGCAAGCGG CGGGGTCCAG CGCGTGTTCG TCGTGAACCT GCCGGGAGCT
GGCGTCGGTG GTGGCGGGCT TGGCGATCTG GCTGGGGGTG AGCGAGCCGG GCGCGCTGCG
CGTCGTGCAG CAGCTCGGGG TGGTCGGTTC GGCAGGCTCG GGCAGATCTT CAATACGGGG
CGTGCGTTGT TCGGTCGCGT TGCGCCGTAT GCCGGCAAGC TCGCCGTGGC AGGCACGGTG
TTGAAGCTCG GCCTCGCGGC GCGTGAAGCG TACGCCGTCG CGTCGAGCAC CGACACCAGC
ACGCAGAAGG CGAACCGCTT TGCGGGGATT GCCGGGAGCC TTGCCGGTGG CGTGATGGGC
GCGAAGGTCG GCGCAATGAT CGGAGCGCTC GGCGGGCCGA TCGGCTCGGC GGTGCTCGGT
GTGATTGGCG GTGCGGTCGG CACGTTTGCC GGCGACAAGC TGTTCAGCGC TGTTTCGCGC
AGGGTGCTGG ATCGTAAGCC TGACGATTCG CCTGCGAACG TCGCAGCGGT CGCGAAAGTG
AAGGCGCTCG TGCCGGATGC GGCCGGCATC GGCGCTCGAT CGGGGCCGCG TATCGAACAG
CAGAACACCT TCGCGCCGGT CTTTCACGTG AAGGTCGAAG CGAGCGATGC CGACATGGCT
AACAAGTTCC TCGCGCAGGT CAGTCCGATG CTGACACGCA TGATGGACGA GCATCAACGC
AAAGCGAACA GCCGCACGGC GATGTTCGAT GCGCCGCATA TGTAA
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| Protein sequence | MAKDLALGIV IGGAVSATFG KAITDTSSKI DAMKKRANDS RLWQRQIGET MRLQDEFRRL
HLAGDSAADG IRRKLDSNLK SLRDAGIEVD RLDRAYARLG RTTRGLDLKA SGYERLTAGR
EAGRGVIGDA VKLTASVAVP ATIAANYQAI IRDIAIKAGI ARTQEEAAMG SRIRRDAGAN
GIGRNDLADA VNQMVAGGMD LNRALNFAPL VAKFSIGQGA TTVETAKMIQ ALQQNAEIVD
PRQMAKALEA IAYLGKEGSF ESVDMARWFP VLLAEMKKIG ITGQDSVTQL GAMLQVQMKT
AGSSDEAANN LKNWFSKIGS GETERNYAKA GVDYQAKMRE AIGKGWSTLE ASFVLARAYI
ERVDPAKAKQ LASAAKQFNS EMDPAKRQAQ MAAFAETMKT GDLFNDMQVK AALTAYMQNA
ELYTNLKRNA QDASGEIQKD LEARRETSKQ IWSEVGQRWD DAMRSIGDAL RPITDRIGEG
AKGLGSGIQS VADAAPKATA AVVGIAGAAL AFRGARALWS IGRGAFDIAR GTVLARGGRA
AAGGSRAAGG VVGRALDALG GAAAASGGVQ RVFVVNLPGA GVGGGGLGDL AGGERAGRAA
RRAAARGGRF GRLGQIFNTG RALFGRVAPY AGKLAVAGTV LKLGLAAREA YAVASSTDTS
TQKANRFAGI AGSLAGGVMG AKVGAMIGAL GGPIGSAVLG VIGGAVGTFA GDKLFSAVSR
RVLDRKPDDS PANVAAVAKV KALVPDAAGI GARSGPRIEQ QNTFAPVFHV KVEASDADMA
NKFLAQVSPM LTRMMDEHQR KANSRTAMFD APHM
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