| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1488 |
|---|
| Symbol | |
|---|
| ID | 5379775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 1577687 |
|---|
| End bp | 1580032 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640834147 |
|---|
| Product | TP901 family phage tail tape measure protein |
|---|
| Protein accession | YP_001370034 |
|---|
| Protein GI | 153008819 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5283] Phage-related tail protein |
|---|
| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAACC TGACGTCATC CCTGCTCGTC CGGCTTATCG ACGGCGTTTC CAAGCCAGCG
ACAAAGGCTG CTACTGCTCT TCGCAGCATT GGCAAGGCTG CAACCGATAT CAACGGTATG
CAGTCCCGAT TAAATTCGGC GATAGACCGC AATAACAAAG CGCTCGACAA CGCGCGCGGT
CGAATGGTCG ATGCTGTCGC GGCGTTCTAT ACGCTCAAGT CGGCACTGTC CGCGCCGTTA
GACGCGGCAA TGAACCTAGA AACGCAGCTT GAGGATATCG GTCAGAAGGC CAATATCCCG
CAAGAGCGTC TTGGCGCTCT TGGCAAGCAG CTTCGCCAAG TTGCCCGCGA AACCAATCAG
GCAACATCGA AGATGGCGCA GGGTATGGAT ACCCTTGTCG GCTTCGGCGC GAATGAAAAT
GACGCGCTCG GCCTTCTCAA GCCAATTGGT CGAGCCGCGA CCGCTTATCG TGCCGAAGTT
GACGATCTTG CTAAGGCTGG CTTTGCCGCC TTGGACAATC TCAAGGTGCC CGCTACGGAC
TTCGGCAAGG CGCTCGACGC CATGGCGCAG GCCGGTAAGG AAGGCGCTTT TGAGCTTCGC
GATATGGCTC AATATTTCCC GTCGCTCGGC GCTGCCTATC AGGGCTTGAA GCAAAAGGGT
GTTCCCGCCG TCGCTGATCT TTCGGCAGCT TTGCAGATCG TGCGCAAAGG CGCAGGAGAT
AGCGAAGAAG CGGCAACCAA CCTCGCCAAC GTCCTTCAAA AGATCAACGC ACCACAGACG
CGTAAAGCCT TTGACAAAAT GGGCGTCGAT CTTGAAAAGT CGATGAAGAA GGCAATGGAC
AAAGGCATGA CGCCTATTGA AGCCATTGCC GAAATCACGA ACCGCACACT TAAAGGCGAC
CTCGGCAAGC TCGGCGACCT TTTCCAAGAT GCTCAGGTAC AGAAGGGCTT GCGCCCTCTA
ATCCAAAACA TTCTTGAATA CCGCCGCATT CGCGCCGAAG CGATGAAAGC GCAGGGCGTC
GTTGAAGAAG ATTATCAGCG CCGTCTTAAA ACTTCGCGCG GCTTCGCGGA TCGCCTGCGC
GCTACTATTG AAAACCTCAA TGCTTCGCTA GGCGTTGCAC TTCTTCCGGC GTTCAACGAT
ATCGCTGATG CGGTATCGCT TGCGGCGACG AAGCTGGCTG AATTTGCCGA AGCCAATCCG
AAGCTAACCC GTTCGATCGT TCTGGTTACG TCGGCGCTGA TCGGCCTCCG CATTGCACTG
ACGGCCCTTA ATTTCGTCGG CCTAATGGCG AAGGGCGGCG CGCTTTCTGT GCTTTCTCTT
GGGTTGCGCG GTATCGCACC TGCGGCGTTC GTGGCAAGCA AGGTTCTTAT GGGGCCACTT
CGCAAAAGCT TGTCCGTTGC ATCCGGCTAC TTCGGTACTC TCGCTCTTCG CTCAAGGCTT
GCTACGGCTG CAACCGGCAA AGCGCCGGGC GTTTTTGCCC GGCTCGCCGA TGCCGGTATT
GTTGCCGGTC GCGGCCTTCT GAGGATGCTA AATCCGCTCA ATCTCTTGCG CGGTGGCTTC
TCCATCCTAC GCGGGGCAGC GGTAGCGCTT CGTGGCGCTC TGATGTTTAC CGGCGTCGGC
GCTGTCCTAG CCGGGATCGC GGCGGCAGGT ACGCTGATCT ACAACAATTG GGAAGGATTG
AAATCCTTCT TCGTTGGTGT CGGGGAAGGC TTCGTCAAAG CACTTGAGCC GGTAAAACCG
ATCATTGAAC CTATCGCGAA GTTTTCGACG GATATCTTCA ATTCGATTAG CAATCTCCTT
GGACCGTTGG GCGCAACAAA CGCCGAATGG AAGTCATGGG GTGAAACGGT CGGCGGCGTC
GTCGGCGGTG CCGTATCAAC TATAATCGAA AAGATCAGCA CGCTTGTAGG CTGGCTTCGG
TCGGGCGTTG AAGCGGCAGG CAAGCTTATG TCTGCACTGT CCGGACCCGT TGGCCCTAGC
GGCCTTCCTT ATACCGTTAC TGGTGGCTCC GATGGTTCTG GCGGCGTGAA TACGCCTTCG
TACATGGGCG GAGCTATCGT ACCGGACGGT AAGCGTGCAA AGGGCGGGCC AATCTCTGCC
GGAAGTACGT ACCTGACGGG CGAAGACGGG CCGGAAATTA TTACGCCTAG CAGGAATGGT
TACGTGCATC CAAACGGGAA AGCGCCCGGC GGGTTCGCCG GATCAACGCG TGCTTCTGCT
GCCGGTTCAC GTTTTCAGTT TGGCGACATT CATATCCACG GCGTCAGCAA TCCAGAAAGC
GTCGGGCGGA AACTTAACGA CGCTATCGAA GCCCAACTTC GCGGAATTCA TAGCGATTGG
GACTAA
|
|---|
| Protein sequence | MANLTSSLLV RLIDGVSKPA TKAATALRSI GKAATDINGM QSRLNSAIDR NNKALDNARG
RMVDAVAAFY TLKSALSAPL DAAMNLETQL EDIGQKANIP QERLGALGKQ LRQVARETNQ
ATSKMAQGMD TLVGFGANEN DALGLLKPIG RAATAYRAEV DDLAKAGFAA LDNLKVPATD
FGKALDAMAQ AGKEGAFELR DMAQYFPSLG AAYQGLKQKG VPAVADLSAA LQIVRKGAGD
SEEAATNLAN VLQKINAPQT RKAFDKMGVD LEKSMKKAMD KGMTPIEAIA EITNRTLKGD
LGKLGDLFQD AQVQKGLRPL IQNILEYRRI RAEAMKAQGV VEEDYQRRLK TSRGFADRLR
ATIENLNASL GVALLPAFND IADAVSLAAT KLAEFAEANP KLTRSIVLVT SALIGLRIAL
TALNFVGLMA KGGALSVLSL GLRGIAPAAF VASKVLMGPL RKSLSVASGY FGTLALRSRL
ATAATGKAPG VFARLADAGI VAGRGLLRML NPLNLLRGGF SILRGAAVAL RGALMFTGVG
AVLAGIAAAG TLIYNNWEGL KSFFVGVGEG FVKALEPVKP IIEPIAKFST DIFNSISNLL
GPLGATNAEW KSWGETVGGV VGGAVSTIIE KISTLVGWLR SGVEAAGKLM SALSGPVGPS
GLPYTVTGGS DGSGGVNTPS YMGGAIVPDG KRAKGGPISA GSTYLTGEDG PEIITPSRNG
YVHPNGKAPG GFAGSTRASA AGSRFQFGDI HIHGVSNPES VGRKLNDAIE AQLRGIHSDW
D
|
|---|
| |