40 homologs were found in PanDaTox collection
for query gene Noc_0077 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 360 aa  715    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  60.87 
 
 		 374 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  55.29 
 
 		 362 aa  359  5e-98  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  55.29 
 
 		 362 aa  359  5e-98  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  53.8 
 
 		 357 aa  350  3e-95  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
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NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  56.9 
 
 		 356 aa  348  8e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  51.28 
 
 		 357 aa  347  1e-94  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  47.11 
 
 		 387 aa  303  4.0000000000000003e-81  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  47.46 
 
 		 387 aa  302  5.000000000000001e-81  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  47.23 
 
 		 387 aa  300  2e-80  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  58.5 
 
 		 292 aa  300  3e-80  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  38.44 
 
 		 351 aa  219  6e-56  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  31.55 
 
 		 352 aa  161  2e-38  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  28.23 
 
 		 348 aa  136  7.000000000000001e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  31.34 
 
 		 351 aa  134  3e-30  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  30.72 
 
 		 367 aa  125  9e-28  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_3065  hypothetical protein  70.93 
 
 		 100 aa  120  3.9999999999999996e-26  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  30.97 
 
 		 357 aa  118  1.9999999999999998e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  33.12 
 
 		 197 aa  94  3e-18  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.150878 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  25.73 
 
 		 387 aa  85.5  0.000000000000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  23.41 
 
 		 353 aa  69.7  0.00000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  24.86 
 
 		 389 aa  65.9  0.0000000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  24.86 
 
 		 389 aa  64.3  0.000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  27.67 
 
 		 585 aa  60.5  0.00000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.269465 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  23.84 
 
 		 343 aa  58.2  0.0000002  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  24.35 
 
 		 402 aa  57.4  0.0000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  24.21 
 
 		 385 aa  57.4  0.0000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  26.13 
 
 		 384 aa  57  0.0000005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  23.93 
 
 		 400 aa  56.6  0.0000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  23.93 
 
 		 400 aa  56.6  0.0000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  23.96 
 
 		 404 aa  55.5  0.000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  23.28 
 
 		 381 aa  55.8  0.000001  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  22.8 
 
 		 374 aa  52.8  0.000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  23.6 
 
 		 383 aa  50.8  0.00004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  24.29 
 
 		 419 aa  50.4  0.00005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  26.92 
 
 		 429 aa  47.8  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  25.39 
 
 		 429 aa  46.2  0.001  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  20.32 
 
 		 385 aa  45.4  0.002  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  24.78 
 
 		 395 aa  44.3  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  23.27 
 
 		 369 aa  43.1  0.007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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