31 homologs were found in PanDaTox collection
for query gene Namu_3702 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 
348 aa  669    Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  50.61 
 
 
352 aa  298  9e-80  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  41.29 
 
 
357 aa  232  7.000000000000001e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  30.12 
 
 
362 aa  160  4e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  30.12 
 
 
362 aa  160  4e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  28.99 
 
 
357 aa  155  8e-37  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  29.28 
 
 
357 aa  155  1e-36  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal 
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  36.62 
 
 
387 aa  150  3e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  30.25 
 
 
360 aa  149  6e-35  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  35.8 
 
 
387 aa  148  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  36.25 
 
 
387 aa  146  4.0000000000000006e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  54.86 
 
 
197 aa  145  7.0000000000000006e-34  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.150878 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  31.82 
 
 
351 aa  143  4e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  34.46 
 
 
374 aa  137  4e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  33.33 
 
 
356 aa  132  7.999999999999999e-30  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  27.44 
 
 
351 aa  112  1.0000000000000001e-23  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  29.55 
 
 
367 aa  110  3e-23  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  32.01 
 
 
292 aa  109  6e-23  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  31.4 
 
 
585 aa  60.5  0.00000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.269465 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  24.21 
 
 
389 aa  60.1  0.00000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  24.21 
 
 
389 aa  59.3  0.00000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  23.62 
 
 
402 aa  55.1  0.000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  23.75 
 
 
385 aa  55.1  0.000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  21.39 
 
 
387 aa  53.5  0.000005  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  22.66 
 
 
419 aa  53.1  0.000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  28.75 
 
 
429 aa  50.1  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0711  C4-dicarboxylate transporter/malic acid transport protein  22.73 
 
 
312 aa  49.3  0.00009  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  24.93 
 
 
383 aa  49.3  0.0001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  27.6 
 
 
378 aa  43.9  0.004  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  24.79 
 
 
382 aa  43.5  0.005  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  23.83 
 
 
384 aa  43.1  0.006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>