Gene Caci_5803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5803 
Symbol 
ID8337164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6704163 
End bp6705452 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content73% 
IMG OID644958907 
ProductC4-dicarboxylate transporter/malic acid transport protein 
Protein accessionYP_003116502 
Protein GI256394938 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCC GATCCTCCAG ACCCGAGCAG GCCTTGAACG CGCGCACAAA AAGGCCGACC 
GACTCCGACA GCCCAGCCGA AGCACACGGT TCGGCCAGCC CGACCACCGC CTCCGCCGCG
ACCAGCCCAG ACCGGGTCAG CAGGCCACCC GACACATCCG ACCCGACTGG CGCGACCGGC
TCAAGCAGCC CAACCACCGC CTCCGCCGCG AGCAGCCCGG CCAGCCCCGG CAACTCGGCC
GGCGCAACCG CCGCCTCCAC TGCTGCCAGC CCGACCCCCA CCCCGGCCTC CACCTCCACC
AACCCCCTCG CCAACGTCCT CTCCTGGTTC GCCGCCCAAC CCCCCGCCGC GGGGTCCGCC
GTCATGGCGA CCGGCATCGT GTCGATCGGG CTGCGGCAGG TGGGTGCGCA GGTGCTGTCG
GTGGTGGCGC TCGTGTTGGC GGTGCTGCTG TGGCTGGCGC TCGCTGATGA CTTCGGGCGG
CGGCTGGTGT GGCAGCGGGG GCGGTGGGTG TCCGAGGCGC AGACGCCGCC GGCGTTGACC
GCGGTGGCGG CGACGACGGT GCTCGGGGTG CGGTTCACGC TGGCCGGGTG GTTGGCCGTG
GCGGTGGGGC TGCTTGTGGT CGCGGCGGTT TTGTGGCCGT TGCTGTTGTG GGCGGTGGTG
CGGCGTCTGC GGCCGCATAT GCCGGGTGCG GTGTTCCTCA TCTGCGTGGC GACGCAGGGG
TTGGTGGCGC TGGGTGCGGC GCTGGCGGTC GCGTTGCCGG CGCGGTGGTT GCTCGGGCCG
GCGTTGGTGC TGTTCGTGTT CGGGCTCGTG TTGTACGTCG ACGCGCTGGC GCACTTCGAC
TTCGGTGCCG TGCGGAGCGG CGCCGGGGAT CACTGGGTCG CCGGCGGTGC GCTGGCGATC
TCGGCGCTGG CGAACGCGAA GCTCACCGAA GCCGAAGGCG GGTCCGGCGG GTTGCACAGC
ACGTTGCGCG TCACCGCGCT CGTCCTGCTC GCCTTGGCGT GGGTGTGGTA CGCGGTCCTC
GCCGCATCGG AAATCCGCTG GCCGCGCCTG CGCTACGACG TCCGGCGCTG GGCGACGATC
TTCCCCATGG GCATGACCGG CGCGGCGACC GACGAGGTGG CGAAGGCGAG CGGCTGGACG
TGGCTCACGA CCCCGGGCCA CGTCCTGGTG TGGATCGCGG CCGCGGCGTG GCTCGTCGTC
TTCGCGGGTC TGCTCAGGGA AGCCGCGAAG ACGACGAGCC AGTCCGGGGC AAGCCAGTCC
GGGACAAGCC AGCCTCACCC GCCGACCTGA
 
Protein sequence
MISRSSRPEQ ALNARTKRPT DSDSPAEAHG SASPTTASAA TSPDRVSRPP DTSDPTGATG 
SSSPTTASAA SSPASPGNSA GATAASTAAS PTPTPASTST NPLANVLSWF AAQPPAAGSA
VMATGIVSIG LRQVGAQVLS VVALVLAVLL WLALADDFGR RLVWQRGRWV SEAQTPPALT
AVAATTVLGV RFTLAGWLAV AVGLLVVAAV LWPLLLWAVV RRLRPHMPGA VFLICVATQG
LVALGAALAV ALPARWLLGP ALVLFVFGLV LYVDALAHFD FGAVRSGAGD HWVAGGALAI
SALANAKLTE AEGGSGGLHS TLRVTALVLL ALAWVWYAVL AASEIRWPRL RYDVRRWATI
FPMGMTGAAT DEVAKASGWT WLTTPGHVLV WIAAAAWLVV FAGLLREAAK TTSQSGASQS
GTSQPHPPT