More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0311 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  100 
 
 
321 aa  636    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  50.17 
 
 
316 aa  313  2.9999999999999996e-84  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  47.16 
 
 
309 aa  295  1e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  50.17 
 
 
316 aa  292  4e-78  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  49.14 
 
 
305 aa  292  5e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  51.41 
 
 
317 aa  279  5e-74  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  45.49 
 
 
313 aa  266  4e-70  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
315 aa  264  1e-69  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  43 
 
 
316 aa  259  3e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  47.02 
 
 
306 aa  252  6e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  42.23 
 
 
314 aa  250  2e-65  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  41.27 
 
 
321 aa  248  7e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  40 
 
 
317 aa  242  6e-63  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  41.8 
 
 
314 aa  241  9e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  40.07 
 
 
321 aa  238  8e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  43.48 
 
 
283 aa  238  8e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  42.42 
 
 
317 aa  237  2e-61  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  43.84 
 
 
318 aa  236  3e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
319 aa  234  1.0000000000000001e-60  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  39.51 
 
 
298 aa  234  2.0000000000000002e-60  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  41.47 
 
 
307 aa  233  4.0000000000000004e-60  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
319 aa  231  1e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  42.44 
 
 
285 aa  231  2e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
293 aa  230  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  38.21 
 
 
305 aa  230  2e-59  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  42.41 
 
 
318 aa  230  3e-59  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  43.23 
 
 
305 aa  229  4e-59  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
296 aa  228  9e-59  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  38.99 
 
 
322 aa  228  9e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
315 aa  228  1e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
302 aa  228  2e-58  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
335 aa  227  2e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  40.38 
 
 
319 aa  226  3e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  41.81 
 
 
307 aa  226  6e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  41.16 
 
 
305 aa  225  6e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  40.06 
 
 
319 aa  225  7e-58  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  43.19 
 
 
321 aa  225  7e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
324 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  40.06 
 
 
335 aa  224  1e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  39.78 
 
 
296 aa  223  3e-57  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  39.07 
 
 
296 aa  222  7e-57  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  39.07 
 
 
296 aa  222  7e-57  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  42.37 
 
 
302 aa  222  8e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  40.33 
 
 
320 aa  222  8e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
296 aa  221  9.999999999999999e-57  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
292 aa  221  9.999999999999999e-57  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
318 aa  221  9.999999999999999e-57  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
314 aa  221  9.999999999999999e-57  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
296 aa  221  9.999999999999999e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
292 aa  221  1.9999999999999999e-56  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
296 aa  220  3e-56  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  38.71 
 
 
296 aa  220  3e-56  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  41.5 
 
 
317 aa  220  3e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  39.44 
 
 
293 aa  219  6e-56  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  37.42 
 
 
317 aa  219  6e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
314 aa  216  4e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  42.66 
 
 
309 aa  215  9e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
317 aa  214  9.999999999999999e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  42.05 
 
 
313 aa  214  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
320 aa  213  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
317 aa  211  9e-54  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  38.56 
 
 
319 aa  211  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
305 aa  209  4e-53  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
300 aa  209  5e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  37.38 
 
 
323 aa  208  8e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
308 aa  206  5e-52  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
309 aa  205  7e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
308 aa  205  8e-52  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  36.77 
 
 
314 aa  205  9e-52  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.16 
 
 
309 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
318 aa  204  2e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
331 aa  203  3e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
300 aa  203  4e-51  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  40.99 
 
 
313 aa  202  5e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  38.19 
 
 
309 aa  202  7e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  37.54 
 
 
324 aa  201  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
316 aa  200  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
316 aa  199  5e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  38.16 
 
 
294 aa  198  7.999999999999999e-50  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
296 aa  197  2.0000000000000003e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
308 aa  197  2.0000000000000003e-49  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  37.32 
 
 
300 aa  196  3e-49  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
313 aa  197  3e-49  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  38.93 
 
 
307 aa  195  7e-49  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
307 aa  195  7e-49  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
308 aa  195  7e-49  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
306 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
318 aa  194  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
292 aa  194  2e-48  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  36.83 
 
 
318 aa  194  2e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
299 aa  192  5e-48  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
320 aa  192  5e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.77 
 
 
320 aa  192  7e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  35.85 
 
 
319 aa  191  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  36.83 
 
 
318 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
321 aa  190  2e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  37.63 
 
 
305 aa  189  5e-47  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
295 aa  188  1e-46  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
316 aa  188  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
299 aa  187  1e-46  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
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