20 homologs were found in PanDaTox collection
for query gene YPK_3752 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_3752  phage transcriptional regulator, AlpA  100 
 
 		 93 aa  192  2e-48  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.433172  n/a   
 
 
-
 
NC_012912  Dd1591_0922  phage transcriptional regulator, AlpA  69.33 
 
 		 78 aa  109  1.0000000000000001e-23  Dickeya zeae Ech1591  Bacteria  normal  0.124152  n/a   
 
 
-
 
NC_007954  Sden_0315  prophage CP4-57 regulatory  50.57 
 
 		 98 aa  82.8  0.000000000000002  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2683  phage transcriptional regulator, AlpA  64.71 
 
 		 77 aa  67.4  0.00000000007  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000806139  n/a   
 
 
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NC_009438  Sputcn32_2902  phage transcriptional regulator, AlpA  55.56 
 
 		 69 aa  65.5  0.0000000002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_0551  phage transcriptional regulator, AlpA  43.75 
 
 		 80 aa  63.2  0.000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_0386  DNA-binding protein, putative  45.83 
 
 		 82 aa  62  0.000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_2017  hypothetical protein  40 
 
 		 86 aa  60.5  0.000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.425283  n/a   
 
 
-
 
NC_010498  EcSMS35_0941  AlpA family transcriptional regulator  39.39 
 
 		 74 aa  60.5  0.000000009  Escherichia coli SMS-3-5  Bacteria  normal  0.30814  normal  1 
 
 
-
 
NC_008577  Shewana3_3781  hypothetical protein  52.46 
 
 		 75 aa  60.1  0.00000001  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.650876 
 
 
-
 
NC_008322  Shewmr7_0347  phage transcriptional regulator, AlpA  41.1 
 
 		 81 aa  55.8  0.0000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.24522 
 
 
-
 
NC_012918  GM21_2339  phage transcriptional regulator, AlpA  41.38 
 
 		 73 aa  50.4  0.000008  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010658  SbBS512_E2186  prophage CP4-57 regulatory protein (AlpA)  37.74 
 
 		 85 aa  47.8  0.00005  Shigella boydii CDC 3083-94  Bacteria  normal  0.0232094  n/a   
 
 
-
 
NC_012917  PC1_3275  phage transcriptional regulator, AlpA  45.1 
 
 		 86 aa  47.4  0.00007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1062  phage transcriptional regulator, AlpA  36.67 
 
 		 75 aa  45.8  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.979085  normal  0.790745 
 
 
-
 
NC_003910  CPS_2950  hypothetical protein  37.74 
 
 		 103 aa  43.1  0.001  Colwellia psychrerythraea 34H  Bacteria  normal  0.058037  n/a   
 
 
-
 
NC_012917  PC1_0716  phage transcriptional regulator, AlpA  43.14 
 
 		 86 aa  43.5  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_3429  DNA-binding protein, putative  31.88 
 
 		 80 aa  42  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  hitchhiker  0.000259221  n/a   
 
 
-
 
NC_009439  Pmen_1159  phage transcriptional regulator, AlpA  36 
 
 		 62 aa  40.4  0.008  Pseudomonas mendocina ymp  Bacteria  normal  0.0925485  normal  0.345427 
 
 
-
 
NC_009512  Pput_3427  phage transcriptional regulator, AlpA  37.04 
 
 		 70 aa  40  0.01  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
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