Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2186 |
Symbol | |
ID | 6272820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1989650 |
End bp | 1989907 |
Gene Length | 258 bp |
Protein Length | 85 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641726212 |
Product | prophage CP4-57 regulatory protein (AlpA) |
Protein accession | YP_001880700 |
Protein GI | 187731152 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0232094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATTT ATTCTCTTGT TGATGAAAAC GATTTGCGCA CAATGAAGGA CATTGATCGG TTCATTCGTG AAAAAGAGTG CATAGCACTT ACCACGCTGG CAAACTCAAC ACGCTGGAAA ATGGAGCAGG CAGGTAAATT CCCGCGACGT ATCAAGATCG GTGAACGTGC TGCAGGGTAT CGACTTTCAG AGGTTCAGGC ATGGATCCGT GGTGAGTGGC ATCCTGGATG GAAACCTGGA AAAACAAAAC AGCAATAA
|
Protein sequence | MAIYSLVDEN DLRTMKDIDR FIREKECIAL TTLANSTRWK MEQAGKFPRR IKIGERAAGY RLSEVQAWIR GEWHPGWKPG KTKQQ
|
| |