| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2683 |
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| Symbol | |
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| ID | 5137609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2840525 |
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| End bp | 2840758 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640534131 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001218561 |
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| Protein GI | 147675272 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000806139 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCCA TAGAAAAACT CACCCAACCT AACCAACTCT CTTGTGACCG ATTTGTCCGA
GAAGCAGAAC GTCGCCGTAT CACCGCCATT TCACGCAGCC AAGCTTGGAA GCTTGAAAAA
GAAGGTCGCT TCCCTCCTCG TATCAAGTTA GGTAGCCGTT CCGTCGTTTG GCGACTTTCT
GACCTTACAC AGTGGCTAGA CAAACAAGCA GGCCAATATT CGGAAGAAGC ATAA
|
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| Protein sequence | MTAIEKLTQP NQLSCDRFVR EAERRRITAI SRSQAWKLEK EGRFPPRIKL GSRSVVWRLS
DLTQWLDKQA GQYSEEA
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