Gene Shewmr7_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0347 
Symbol 
ID4257050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp387382 
End bp387627 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content52% 
IMG OID638120952 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_736407 
Protein GI114045857 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.24522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC AAACCTTCGT TTTGCCTAGT GAAGAAGTTC GTACTCAAGT GCTCAGTCAA 
TCAGGTCAGT GTGAGCGACT GGTCAGAGAG CCTGACCGTA AGATGATCAC TGGCGTCAGT
CGAACTCAGT GGTGGATGAT GGAACGGCAA GGCTTAGTTC CCCAACGGGT CAGGCTGAGT
GCCCATTGTG TGGCTTGGCG GCTTTCAGAT CTGCTGTGGT GGATTGAGCA GAGAAAAGCC
GCTTGA
 
Protein sequence
MSEQTFVLPS EEVRTQVLSQ SGQCERLVRE PDRKMITGVS RTQWWMMERQ GLVPQRVRLS 
AHCVAWRLSD LLWWIEQRKA A