| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0941 |
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| Symbol | |
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| ID | 6147102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 958002 |
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| End bp | 958226 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641615828 |
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| Product | AlpA family transcriptional regulator |
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| Protein accession | YP_001743020 |
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| Protein GI | 170683381 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.30814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAAA ATACACAATT TCAATCACTA ACAGATCGCG TAATTCGTGA GGATGAATGT
CGTAAGTTAA CAGGCGTCAG CCGTACTACA CGCTACGAAC TGGAGAAGAA AGGGGGCTTT
CCGTCTCGCC GTAATCTTGG GGGGCGTTCT GTAGGCTGGT TGCTTTCCGA AGTTATGGAC
TGGGTGCAAA GCCGTGACCG CGTTAATTCA GGTAAGGCAG CGTAA
|
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| Protein sequence | MNQNTQFQSL TDRVIREDEC RKLTGVSRTT RYELEKKGGF PSRRNLGGRS VGWLLSEVMD
WVQSRDRVNS GKAA
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