| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3427 |
|---|
| Symbol | |
|---|
| ID | 5193210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3828540 |
|---|
| End bp | 3828752 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640587875 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_001268737 |
|---|
| Protein GI | 148548635 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGT TAGATGGAAT TGATCGCCTG CTTCGCCTGC CCGATGTGCT CCGCATCACT
GGCATGGGGC GCAACACCGT GTACACACGA ATTAAGGAAG GAACATTCCC AAAACAGGTT
AAGATAGGCC CAAAATCGGT CGCCTGGCGC CAGTCAGACA TCAACCAGTG GATGGCCTCA
CTCAACCCCA GCGACGACCA ATCAGTACAT TGA
|
|---|
| Protein sequence | MAQLDGIDRL LRLPDVLRIT GMGRNTVYTR IKEGTFPKQV KIGPKSVAWR QSDINQWMAS
LNPSDDQSVH
|
|---|
| |