| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0716 |
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| Symbol | |
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| ID | 8131640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 838409 |
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| End bp | 838669 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864000 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_003016306 |
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| Protein GI | 253687116 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGTCAG CCACACCCCA AACTCCCATT CCTGCTATGC CCCCGATGCC ACTTCATCCG
GCCAGAGAAC GCTTAATGCG CCTGCCGGAA GTGCTGCACG TCACTGGCAT TTCCCGCTCG
ACGCTGTATG AACTGAGCAG CCGCAAAGCC TTTCCCGCCA ACGTTTCGCT GGGTGGGAAA
AGTGTCGCGT GGGTTGAGTC CGAAATTCAT CACTGGGTAG CCGAGCGTAT CGCCGCCCGT
CAACAGGAGA ACCACGCATG A
|
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| Protein sequence | MLSATPQTPI PAMPPMPLHP ARERLMRLPE VLHVTGISRS TLYELSSRKA FPANVSLGGK
SVAWVESEIH HWVAERIAAR QQENHA
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