24 homologs were found in PanDaTox collection
for query gene Swit_3894 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_3894  TetR family transcriptional regulator  100 
 
 		 219 aa  435  1e-121  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_0933  TetR family transcriptional regulator  51.74 
 
 		 196 aa  179  2e-44  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_008048  Sala_2085  TetR family transcriptional regulator  47.92 
 
 		 202 aa  160  1e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.839417  normal  1 
 
 
-
 
NC_010338  Caul_4101  TetR family transcriptional regulator  40.38 
 
 		 204 aa  125  4.0000000000000003e-28  Caulobacter sp. K31  Bacteria  normal  1  normal  0.899389 
 
 
-
 
NC_010338  Caul_4102  TetR family transcriptional regulator  37.06 
 
 		 204 aa  110  2.0000000000000002e-23  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1181  transcriptional regulator, TetR family  32.04 
 
 		 204 aa  80.1  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.000866899  n/a   
 
 
-
 
NC_009719  Plav_1640  TetR family transcriptional regulator  25.79 
 
 		 226 aa  65.9  0.0000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_1816  TetR family transcriptional regulator  29.94 
 
 		 204 aa  65.1  0.0000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.41828  normal  0.136235 
 
 
-
 
NC_007958  RPD_3328  regulatory protein, TetR  29.17 
 
 		 187 aa  47.8  0.0001  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_3570  transcriptional regulator, TetR family  32.52 
 
 		 175 aa  45.4  0.0007  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00083347  n/a   
 
 
-
 
NC_009972  Haur_1014  TetR family transcriptional regulator  26.12 
 
 		 212 aa  43.9  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_0556  TetR family transcriptional regulator  24.41 
 
 		 228 aa  44.3  0.002  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4764  transcriptional regulator, TetR family  32.1 
 
 		 181 aa  43.5  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4079  TetR family transcriptional regulator  24.68 
 
 		 244 aa  43.1  0.003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.780842  normal  0.246764 
 
 
-
 
NC_013595  Sros_8111  putative transcriptional regulator, TetR family  36.07 
 
 		 168 aa  43.1  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_3598  TetR family transcriptional regulator  29.52 
 
 		 227 aa  42.4  0.006  Burkholderia phymatum STM815  Bacteria  normal  0.646734  normal  0.699465 
 
 
-
 
NC_011004  Rpal_3721  transcriptional regulator, TetR family  26.62 
 
 		 260 aa  42.4  0.006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.249433  n/a   
 
 
-
 
NC_013173  Dbac_1926  transcriptional regulator, TetR family  31.76 
 
 		 202 aa  42.4  0.006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.930045  n/a   
 
 
-
 
NC_009656  PSPA7_2630  TetR family transcriptional regulator  36.76 
 
 		 205 aa  42  0.007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0697093  n/a   
 
 
-
 
NC_010338  Caul_3204  TetR family transcriptional regulator  42.62 
 
 		 211 aa  41.6  0.008  Caulobacter sp. K31  Bacteria  normal  0.109794  normal  1 
 
 
-
 
NC_013172  Bfae_28300  transcriptional regulator  32.88 
 
 		 280 aa  41.6  0.009  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2560  transcriptional regulator, TetR family  32.43 
 
 		 196 aa  41.6  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.199189  normal  0.158626 
 
 
-
 
NC_007952  Bxe_B0886  TetR family transcriptional regulator  29.46 
 
 		 231 aa  41.6  0.01  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2619  transcriptional regulator, TetR family  32.86 
 
 		 221 aa  41.6  0.01  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.844619 
 
 
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