Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4764 |
Symbol | |
ID | 8328962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5674880 |
End bp | 5675425 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945207 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003102439 |
Protein GI | 256378779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCGT ACCACCACGG CGACCTGAGG CGAGCGGTGC TGGCCGCAGC GGTCACCGCG ATCACCGAGA GCGGTCCGGC GGCGATCAGC CTGCGCGACC TGGCCCGTAG GGTCGGCGTC TCGCACGCGG GTCCGGTGCA CCACTTCAAG GACAAGGCGG GGCTGCTGAC CGCGCTGGCG ACGGAGGGCT TCGTGCTCCT GTCGGACGCG CTGGCGGCGA CCAGGGACGC GGGTGGCGAC TTCACCGAGA TCGGCGTGGC CTACGTGCGC TTCGCCGTGG AGCACCGGGC GCACTTCGAG GTGATGTTCC GCCCGGACCT CCACCGCCCG GACGACGAGG ACCTGCGAAC CGCGCAGGCG CGGGCGGGCG AGATCCTGGC GAGCGGCGCG GGCACGACCT CCGCACCCGA CCCGGACACC GCGAAGGTCG CCGCGTGGTC GCTGGTCCAC GGCTTCGCGA CCCTGTGGAA CACCGGTGCC CTGTCCCGAC CGGGCGAGGA CCCGGAAGCC CTGGCCAGGG CAGCGGCCCG CCTGCTGTTC CCCTGA
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Protein sequence | MSPYHHGDLR RAVLAAAVTA ITESGPAAIS LRDLARRVGV SHAGPVHHFK DKAGLLTALA TEGFVLLSDA LAATRDAGGD FTEIGVAYVR FAVEHRAHFE VMFRPDLHRP DDEDLRTAQA RAGEILASGA GTTSAPDPDT AKVAAWSLVH GFATLWNTGA LSRPGEDPEA LARAAARLLF P
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