Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0556 |
Symbol | |
ID | 5898011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 606741 |
End bp | 607427 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641561038 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001682187 |
Protein GI | 167644524 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA CTGATGGCCA CAGATATTCG CTCGTCAGCG ACCTGACTTT CCCACCGCGA GAAGGGGGCT ATGCGAACGG GCGCGATACG CGCGAAACGA TCATCAGCGC GGCGTTCCGT CTGCTCATGG ACGAGGGCTA TCGGGCCATC ACCATGCGCC GGGTCGCAAA GGAATGCGGG CTGAAGATAG GCAACGTCAC CTATCACTTC TCATCGAGGG AGGATCTTGT CCGCTCGATG TTTGAGGCCG TAAGTCTGAG CTATCAGGCG GTTGTGACGG ACAAGATTTC GAATGAAGAG GAACAGCCTG AGGGAAGATT TCGCGATTTG TGCAACTTCT TTCTGGACGA CATTAAGACC AGGAAGACAA CGATGGTCTT TCCAGAGCTG TGGGCTCTGT CGAATCATGA CGAATTTGTT TACAATATCG TCAATGATCT GTACGACAGC GCTCGGGAGG TCTTCTTCGA TCTTATTTCG GAGCTAAGGC CGGATCTGTC TGTGGAACTC CGCAATCAAC TGTCGATCGT GGTGCAGGCT TCGATTGAGG GAATGACTGT ATTCGCGGGA TACAAGAAGC CGTTTCACGG TCAAATGGAT CAAATAGAGG CCATAACTGT GAAGGCCTTT ATGGATTTGA TCTCGAACAT CCAAGAGTCT GACGTTCCTC AAGGCGTTCT GGCCTAA
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Protein sequence | MSDTDGHRYS LVSDLTFPPR EGGYANGRDT RETIISAAFR LLMDEGYRAI TMRRVAKECG LKIGNVTYHF SSREDLVRSM FEAVSLSYQA VVTDKISNEE EQPEGRFRDL CNFFLDDIKT RKTTMVFPEL WALSNHDEFV YNIVNDLYDS AREVFFDLIS ELRPDLSVEL RNQLSIVVQA SIEGMTVFAG YKKPFHGQMD QIEAITVKAF MDLISNIQES DVPQGVLA
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