| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0886 |
|---|
| Symbol | |
|---|
| ID | 4008625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2386928 |
|---|
| End bp | 2387623 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637951798 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_554418 |
|---|
| Protein GI | 91779210 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG GAAGCAAGGC TGCCGAGCCT GATACCAACG GCATCCCGTC CGACAGTCCG
CGTACCGACA CCCGGCGCAA GTACGATCCC GAACAGACGA AGCGCAACAT CCTCGAGGTC
GCGACCCAGG AGTTCTCCGC GATGGGACTG ACGGGCGCAC GCGTCGACGC GATCGCGGAA
CGCACGAACA CCACCAAGCG CATGCTGTAC TACTACTTCG GCAGCAAGGA AGGGTTGTAC
CAGGCGGTGC TGGAAAAGGT GTATGGAGAC ATTCGCGCAC TCGAACAGGA TCTGCACGTC
AGCGAACTCG ACCCGATCGA GGGCATGCGC GCGCTAGTCG AGTTTACGTT CGACTATCAC
GACCGTCAGC GCGATTTCGT GCGGCTCGTC ACCATTGAAA ACATTCACGG CGCGAAGTAC
GTCGAGCAGG TCAAGAGCTT CAAAGGCCGC AACGTCACCG TGATTCATAC GATCGAAGAC
CTGCTCAAGC GCGGCATCGC GGCCGGACAG TTCCGCAGCG ACATCGACCC CATCGATCTG
CATCTGCTGA TCAGTTCGCT GTGCTTTCAC CGCATCGGCA ATCGCCATAC CTTCGGTGCG
GCGTTCGGGC GCGACCCGTC GCATCCGCGT TTGCGCGCGC GGCATCGCGC GATGATCGTC
GATGCCGTGC TGCGTTTCGT GCGCAAGGAC GATTGA
|
|---|
| Protein sequence | MKKGSKAAEP DTNGIPSDSP RTDTRRKYDP EQTKRNILEV ATQEFSAMGL TGARVDAIAE
RTNTTKRMLY YYFGSKEGLY QAVLEKVYGD IRALEQDLHV SELDPIEGMR ALVEFTFDYH
DRQRDFVRLV TIENIHGAKY VEQVKSFKGR NVTVIHTIED LLKRGIAAGQ FRSDIDPIDL
HLLISSLCFH RIGNRHTFGA AFGRDPSHPR LRARHRAMIV DAVLRFVRKD D
|
|---|
| |