| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4079 |
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| Symbol | |
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| ID | 3911886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4650499 |
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| End bp | 4651233 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885983 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_487683 |
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| Protein GI | 86751187 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.780842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.246764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA TAAGCCACCG TCGCTGGAGT CAATCGGCGA CGCTTCACGG ATGCATGATG
GACGGACGCC CCGCCAACGA CCAATCGCCC TGGATGCCGT TCGAGAGCCG CCGCCGCGCC
CGCGACGAGA AGCGCGAGGC GGTGCTGCGC ACGGCGGTGC AGCTGTTTCT CGAGCAGGGC
TATCACCGCG CCACCCTGAA CGAGGTGGCC GAGCGGCTGA ACATCACCAA GCCGGCGCTG
TACAACTACT TCCGCAGCAA GGACGAGATC CTGTTCGAGT GCTGGGCGCT GGGGCAGGAG
CAAGTCGACG AGTTCATCGC CGTGATCAAC CGCAGCGGCC AGAACGGCCT CGGCAAGCTG
CGGGCACTGG TGCGCGCCTA TGCCGGGACG ATGGCGACCG ATTTCGGCGC CAGCCTGGTG
CGGTTCGATC CGCGCGACCT GAAGCCGCAC AATGCGCAGA CGGTGCGCGA CGCCAAGCGC
AGTATCGACC GGACGTTTCG GCGCTACATC GCGGAGGGCA TCGCCGACAA ATCGATCAAG
CCGTGCGATC CGAAGCTGGC CGCATTCGCG ATCGCCGGCT CGCTGAATTG GATCGGCCAT
TGGTACCAGC GCGGCGGCCC GCTGACGCCG GATGCGATCG CCGATGAATT CGCTGTCCGT
CTCACGGAAG GGCTCGCCGC GCCATCGATC AAGAAGAGCG TCGTCAAGGC GCCGACTGCA
ACAAAGAAGA AGTAA
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| Protein sequence | MSNISHRRWS QSATLHGCMM DGRPANDQSP WMPFESRRRA RDEKREAVLR TAVQLFLEQG
YHRATLNEVA ERLNITKPAL YNYFRSKDEI LFECWALGQE QVDEFIAVIN RSGQNGLGKL
RALVRAYAGT MATDFGASLV RFDPRDLKPH NAQTVRDAKR SIDRTFRRYI AEGIADKSIK
PCDPKLAAFA IAGSLNWIGH WYQRGGPLTP DAIADEFAVR LTEGLAAPSI KKSVVKAPTA
TKKK
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