84 homologs were found in PanDaTox collection
for query gene Sked_37200 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_37200  methionine synthase II (cobalamin-independent)  100 
 
 		 408 aa  833    Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3475  Methionine synthase vitamin-B12 independent  80.8 
 
 		 406 aa  679    Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_0200  Methionine synthase vitamin-B12 independent  64.37 
 
 		 402 aa  548  1e-155  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_12410  methionine synthase II (cobalamin-independent)  66.58 
 
 		 403 aa  544  1e-153  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00635164  n/a   
 
 
-
 
NC_008541  Arth_0521  methionine synthase, vitamin-B12 independent  63.2 
 
 		 361 aa  459  9.999999999999999e-129  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_04810  methionine synthase II (cobalamin-independent)  53.69 
 
 		 404 aa  409  1e-113  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0581869  normal  1 
 
 
-
 
NC_007777  Francci3_1991  methionine synthase, vitamin-B12 independent  36.6 
 
 		 390 aa  251  2e-65  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_2409  methionine synthase, vitamin-B12 independent  37.32 
 
 		 377 aa  248  1e-64  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_2235  putative methionine synthase vitamin-B12 independent  38.33 
 
 		 378 aa  246  4.9999999999999997e-64  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_1114  methionine synthase, vitamin-B12 independent  38.42 
 
 		 375 aa  236  5.0000000000000005e-61  Jannaschia sp. CCS1  Bacteria  normal  0.411336  normal  0.158114 
 
 
-
 
NC_013739  Cwoe_2808  Methionine synthase II (cobalamin-independent)- like protein  34.6 
 
 		 395 aa  218  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4393  Methionine synthase vitamin-B12 independent  34.12 
 
 		 398 aa  197  3e-49  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2812  Methionine synthase II (cobalamin-independent)- like protein  32.79 
 
 		 396 aa  196  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0333252  normal  1 
 
 
-
 
NC_008228  Patl_0921  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  28.51 
 
 		 342 aa  73.9  0.000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2516  methionine synthase, vitamin-B12 independent  31.8 
 
 		 340 aa  73.9  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.57162 
 
 
-
 
NC_009441  Fjoh_3839  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.95 
 
 		 343 aa  73.2  0.000000000009  Flavobacterium johnsoniae UW101  Bacteria  normal  0.412292  n/a   
 
 
-
 
NC_012917  PC1_1464  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  28.26 
 
 		 343 aa  71.2  0.00000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2758  methionine synthase vitamin-B12 independent  31.34 
 
 		 340 aa  71.6  0.00000000003  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000302857  normal  1 
 
 
-
 
NC_009524  PsycPRwf_2277  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.19 
 
 		 342 aa  69.3  0.0000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_003054  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.96 
 
 		 342 aa  67.8  0.0000000003  Vibrio sp. Ex25  Bacteria  normal  0.902811  n/a   
 
 
-
 
NC_013421  Pecwa_1367  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.19 
 
 		 343 aa  67  0.0000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7369  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.19 
 
 		 339 aa  67  0.0000000006  Burkholderia sp. 383  Bacteria  normal  1  normal  0.276101 
 
 
-
 
NC_009783  VIBHAR_02800  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.52 
 
 		 344 aa  66.6  0.0000000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007204  Psyc_0846  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 345 aa  66.6  0.0000000007  Psychrobacter arcticus 273-4  Bacteria  normal  0.154728  normal  0.837371 
 
 
-
 
NC_003910  CPS_1151  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.64 
 
 		 347 aa  66.6  0.0000000008  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_1226  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  28.31 
 
 		 343 aa  66.2  0.0000000009  Haemophilus somnus 129PT  Bacteria  normal  0.406716  n/a   
 
 
-
 
NC_012880  Dd703_1778  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.39 
 
 		 343 aa  66.2  0.000000001  Dickeya dadantii Ech703  Bacteria  normal  0.219442  n/a   
 
 
-
 
NC_009438  Sputcn32_2762  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 354 aa  65.9  0.000000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3141  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 359 aa  65.1  0.000000002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3284  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 354 aa  65.1  0.000000002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3132  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.19 
 
 		 354 aa  65.5  0.000000002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01036  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 346 aa  65.1  0.000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.370026  n/a   
 
 
-
 
NC_012912  Dd1591_1862  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.39 
 
 		 343 aa  65.1  0.000000002  Dickeya zeae Ech1591  Bacteria  normal  0.0209984  n/a   
 
 
-
 
NC_011663  Sbal223_1232  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.19 
 
 		 359 aa  65.5  0.000000002  Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.00000000177412 
 
 
-
 
NC_007969  Pcryo_0902  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 355 aa  65.5  0.000000002  Psychrobacter cryohalolentis K5  Bacteria  normal  0.876069  normal  1 
 
 
-
 
NC_009436  Ent638_2113  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 343 aa  64.3  0.000000004  Enterobacter sp. 638  Bacteria  normal  0.46001  normal  1 
 
 
-
 
NC_009485  BBta_5267  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.85 
 
 		 340 aa  64.3  0.000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.082194  normal  0.562242 
 
 
-
 
NC_008345  Sfri_3578  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.32 
 
 		 355 aa  63.9  0.000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_2667  methionine synthase  27.96 
 
 		 355 aa  63.9  0.000000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_3176  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.32 
 
 		 343 aa  63.5  0.000000006  Serratia proteamaculans 568  Bacteria  normal  0.364781  normal  1 
 
 
-
 
NC_008752  Aave_2779  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.4 
 
 		 341 aa  61.6  0.00000002  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1355  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  25.44 
 
 		 345 aa  62.4  0.00000002  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_1044  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  24.03 
 
 		 368 aa  61.6  0.00000003  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.131119 
 
 
-
 
NC_002947  PP_2698  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.75 
 
 		 344 aa  60.5  0.00000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.260342 
 
 
-
 
NC_010322  PputGB1_3090  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.32 
 
 		 344 aa  59.7  0.00000009  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_2855  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.03 
 
 		 343 aa  59.7  0.00000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.0311953 
 
 
-
 
NC_010506  Swoo_4458  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  25 
 
 		 342 aa  59.3  0.0000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_2550  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  28.18 
 
 		 341 aa  58.5  0.0000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.812544 
 
 
-
 
NC_009051  Memar_2152  methionine synthase  26.18 
 
 		 300 aa  58.2  0.0000003  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_009512  Pput_3054  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.32 
 
 		 344 aa  58.2  0.0000003  Pseudomonas putida F1  Bacteria  normal  0.663138  normal  1 
 
 
-
 
NC_013743  Htur_2396  Methionine synthase vitamin-B12 independent  27.8 
 
 		 358 aa  57.4  0.0000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_0080  methionine synthase  27.94 
 
 		 350 aa  57  0.0000005  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0497366  n/a   
 
 
-
 
BN001303  ANIA_05019  Methionine synthase, vitamin-B12 independent, putative (AFU_orthologue; AFUA_3G12060)  22.75 
 
 		 438 aa  57.4  0.0000005  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.807041 
 
 
-
 
NC_007974  Rmet_5073  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  25.68 
 
 		 342 aa  57  0.0000006  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.942078 
 
 
-
 
NC_009440  Msed_2248  methionine synthase  22.64 
 
 		 331 aa  56.6  0.0000007  Metallosphaera sedula DSM 5348  Archaea  normal  0.88722  normal  0.0178602 
 
 
-
 
NC_011886  Achl_1726  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  25.7 
 
 		 348 aa  56.6  0.0000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0182289 
 
 
-
 
NC_009654  Mmwyl1_0388  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  24.56 
 
 		 355 aa  56.2  0.000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.469919 
 
 
-
 
NC_008697  Noca_4810  methionine synthase (B12-independent)  25.33 
 
 		 370 aa  55.8  0.000001  Nocardioides sp. JS614  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3153  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.43 
 
 		 342 aa  56.2  0.000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.720863  normal  1 
 
 
-
 
NC_013922  Nmag_1089  Methionine synthase vitamin-B12 independent  27.32 
 
 		 366 aa  55.8  0.000001  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03755  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  24.77 
 
 		 342 aa  55.1  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1801  methionine synthase II (cobalamin-independent)  24.19 
 
 		 375 aa  54.3  0.000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0841  methionine synthase (B12-independent)  28 
 
 		 385 aa  53.5  0.000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_1559  Methionine synthase vitamin-B12 independent  23.11 
 
 		 369 aa  51.6  0.00003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_2245  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.13 
 
 		 340 aa  51.2  0.00003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0169459  normal  0.14656 
 
 
-
 
NC_009717  Xaut_5047  2-hydroxypropyl-CoM lyase  23.93 
 
 		 376 aa  50.8  0.00004  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009717  Xaut_4865  2-hydroxypropyl-CoM lyase  23.93 
 
 		 376 aa  50.8  0.00004  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.0677813 
 
 
-
 
CP001800  Ssol_1385  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  22.75 
 
 		 332 aa  49.7  0.00008  Sulfolobus solfataricus 98/2  Archaea  normal  0.25974  n/a   
 
 
-
 
NC_011004  Rpal_2475  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  26.13 
 
 		 340 aa  49.3  0.0001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0427  5-methyltetrahydropteroyltriglutamate/ homocystei neS-methyltransferase  21.84 
 
 		 774 aa  48.9  0.0002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_20790  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  23.98 
 
 		 343 aa  48.5  0.0002  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_1987  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  23.62 
 
 		 367 aa  48.1  0.0003  Enterobacter sp. 638  Bacteria  normal  1  normal  0.130415 
 
 
-
 
NC_008528  OEOE_1718  hypothetical protein  22.22 
 
 		 378 aa  48.1  0.0003  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1188  5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase  22.78 
 
 		 767 aa  47.8  0.0004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012029  Hlac_2108  methionine synthase  27.32 
 
 		 356 aa  46.6  0.0007  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.112744  normal  0.0912449 
 
 
-
 
NC_009954  Cmaq_0981  methionine synthase vitamin-B12 independent  25.45 
 
 		 393 aa  46.6  0.0007  Caldivirga maquilingensis IC-167  Archaea  normal  1  normal  1 
 
 
-
 
NC_010483  TRQ2_1533  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  21.41 
 
 		 734 aa  45.1  0.002  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009712  Mboo_0104  methionine synthase  25.12 
 
 		 300 aa  45.8  0.002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.653377  normal  1 
 
 
-
 
NC_013131  Caci_4334  Methionine synthase vitamin-B12 independent  22.3 
 
 		 354 aa  45.4  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0520376  normal  0.182105 
 
 
-
 
NC_013172  Bfae_02700  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  27.65 
 
 		 777 aa  44.7  0.003  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_009376  Pars_1072  methionine synthase, vitamin-B12 independent  22.46 
 
 		 384 aa  45.1  0.003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  0.564481 
 
 
-
 
NC_007948  Bpro_3388  methionine synthase, vitamin-B12 independent  24.16 
 
 		 377 aa  45.1  0.003  Polaromonas sp. JS666  Bacteria  normal  0.101975  normal  0.0229793 
 
 
-
 
NC_013730  Slin_5820  Methionine synthase vitamin-B12 independent  24.45 
 
 		 342 aa  44.3  0.004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.392769 
 
 
-
 
NC_010815  Glov_3721  Methionine synthase vitamin-B12 independent  23.54 
 
 		 365 aa  43.1  0.008  Geobacter lovleyi SZ  Bacteria  normal  0.0129115  normal  0.3687 
 
 
-
 
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