| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3578 |
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| Symbol | |
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| ID | 4280471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4248443 |
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| End bp | 4249510 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136390 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
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| Protein accession | YP_752244 |
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| Protein GI | 114564730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TGATTAACAA AAGAATACTA CCCACTTCAA CTGCAGGCAG TTTACCTAAG
CCCTCTTGGC TTGCTGAACC CGAAACACTT TGGTCAGCTT GGAAACTACA AGGTGAGGAA
TTAATTGAGG GCAAACAAGA CGCTTTACGT TTGTCATTAC AAGATCAACA ACACGCAGGC
ATTGATATTG TTAGTGATGG TGAGCAAACA CGCCAACATT TTGTGACTAC GTTTATTGAA
CATCTTAACG GTGTTGATTT TAATAAGCGT AAAACCGTTA AAATTCGTGA TCGCTATGAT
GCTAGTGTTC CAACGGTTGT CGGCCCTGTT AGTCGCCAAA AATCAGTTTT TGTTGAAGAT
GCCAAGTTTT TACGTCAGCA AACCACGCAA CCCATTAAAT GGGCTTTGCC TGGTCCCATG
ACAATGATTG ATACGCTTTT TGATGACCAT TATAAAAGTC GTGAAAAGCT AGCGTGGGAA
TTTGCTAAAA TTCTTAATCA GGAAGCCAAA GAATTAGAAG CTGCAGGTGT TGATATTATT
CAATTTGATG AGCCAGCATT TAATGTCTTT TTTGATGAGG TAAATGATTG GGGAATTGCT
TGTTTAGAAA GAGCCATTGA AGGACTAAAG TGCGAAACGG CTGTGCATAT TTGTTATGGC
TATGGCATCA AAGCCAATAC TGATTGGAAA AAAACACTGG GCTCAGAGTG GCGACAATAT
GAAAAAGCGT TCCCTAAACT GCAACAGTCT AATATCGATA TTATCTCACT AGAATGTCAC
AACTCTCATG TGCCAATTGA GCTGCTTGAA CTCATTCGAG GTAAAAAAGT GATGGTTGGT
GCCATAGATG TAGCAAGTAA TACGATTGAG ACACCAGAGG AAGTCGCTAA TACCCTCCGA
AAAGCACTTC AGTACGTAGA TGCCGATAAG CTTTATCCAT GCACCAATTG TGGCATGGCG
CCCTTACCTC ATCATGTAGC AAGAGGTAAG TTACATGCCT TAAGTGCAGG GGCTGACATT
GTTAGAAAAG AGCTATCGGC CAAAGGATTG TTGAACCTTA GGGATTAA
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| Protein sequence | MKTLINKRIL PTSTAGSLPK PSWLAEPETL WSAWKLQGEE LIEGKQDALR LSLQDQQHAG
IDIVSDGEQT RQHFVTTFIE HLNGVDFNKR KTVKIRDRYD ASVPTVVGPV SRQKSVFVED
AKFLRQQTTQ PIKWALPGPM TMIDTLFDDH YKSREKLAWE FAKILNQEAK ELEAAGVDII
QFDEPAFNVF FDEVNDWGIA CLERAIEGLK CETAVHICYG YGIKANTDWK KTLGSEWRQY
EKAFPKLQQS NIDIISLECH NSHVPIELLE LIRGKKVMVG AIDVASNTIE TPEEVANTLR
KALQYVDADK LYPCTNCGMA PLPHHVARGK LHALSAGADI VRKELSAKGL LNLRD
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