| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2475 |
|---|
| Symbol | |
|---|
| ID | 6410137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2670847 |
|---|
| End bp | 2671869 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642712354 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_001991464 |
|---|
| Protein GI | 192290859 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTC CGACCACGAT CGCCGGCTCG TTGCCGAAAC CGGAATGGCT GGCCGAGCCC
AACAAACTAT GGGCGCCGTG GAAGTCGACG GGCGCGGAGC TGCTCCGCGC CAAGCGCGAC
GCCACCATCC TGGCGCTGAA GCTGCAGGAA GACTCAGGGA TCGACATCGT CACCGAGGGC
GAACAGGCGC GGCAGCATTT CGTCCACGGC TTCCTCGAAG CCGTCGAGGG CATCGACTTC
GCCCACAAGG TCGAGATGGG CATCCGCAAC GATCGCTACA AAGCGATGGT GCCGCAGGTG
GTGGCGCCGC TGCGGCTGAA GGGCCGCGTT CACGGCTTCG AAGGACAGAT CGCGCGCGCG
CATAGCACGC ACAAGATCAA GTTCACCCTG CCCGGCCCGA TGACGATCAT CGACACCATC
GCCGATCGCC ATTACGGCGA CCGGGTCAAG ATGGCATTCG CCTTCGCCGA ACTGCTCAAC
GAGGAAGCCA AGGCGCTGCA GGCCGACGGC ATTGACATGA TCCAGTTCGA CGAGCCGGCG
TTCAATGTGT ACATGAGCGA GGCTGCCGAC TGGGGCGTCA AGGCGCTGGA ACGCGCCGCG
CAGGACCTGA CCTGCGCCAC CGCCGTCCAC ATCTGCTACG GCTACGGCAT CAAGGCCAAT
ACCGATTGGA AGGAAACGCT CGGCGCCGAG TGGCGGCAAT ACGAGGACAT CTTCCCGGCA
ATCGACGCCA GCTCGATCCA GCAGGTCGCG GTCGAGTGCC GCAATTCAAA AGTGCCGCTG
GAACTGTTGT CGCTGCTGAA GGGCAAGATC GTGCAGGCCG GCGTCATCGA TGTCGCCAGC
GACGAGGTCG AGACGGCGGA AGACGTCTGC GCCACCATCG AAGCGGTGAT GCAGCACGTG
CCGAAGAGCA ACATCATCGC CACCACCAAT TGCGGCATGG CCCCGATGCG CCGCGAAATC
GCCGAAGCGA AACTCGCTGC GCTTGGCGCC GGCGCAGAAT TGGCGCGGGA GCGGTTTAAG
TAG
|
|---|
| Protein sequence | MLFPTTIAGS LPKPEWLAEP NKLWAPWKST GAELLRAKRD ATILALKLQE DSGIDIVTEG
EQARQHFVHG FLEAVEGIDF AHKVEMGIRN DRYKAMVPQV VAPLRLKGRV HGFEGQIARA
HSTHKIKFTL PGPMTIIDTI ADRHYGDRVK MAFAFAELLN EEAKALQADG IDMIQFDEPA
FNVYMSEAAD WGVKALERAA QDLTCATAVH ICYGYGIKAN TDWKETLGAE WRQYEDIFPA
IDASSIQQVA VECRNSKVPL ELLSLLKGKI VQAGVIDVAS DEVETAEDVC ATIEAVMQHV
PKSNIIATTN CGMAPMRREI AEAKLAALGA GAELARERFK
|
|---|
| |