| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0921 |
|---|
| Symbol | |
|---|
| ID | 4171975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1095674 |
|---|
| End bp | 1096702 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638053922 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_660501 |
|---|
| Protein GI | 109897246 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC TTTTACCTAT TACCATCGCC GGTAGCCTGC CTAAACCGTC TTGGCTCGCT
CAACCTGAAA CACTTTGGTC ACCTTGGAAG TTGCAAGACG ATGAACTGGT TCAGGGGAAA
CAGGACGCGC TGCGTTTGTC ATTGTTAAAT CAGCAGCAAG CGGGCATTAA TATCATCAGT
GATGGGGAGC AATCGCGGCA ACACTTTGTG ACCACCTTTA TCGAGCACCT CAGTGGTGTA
GATTTCGAGA ACCGTAAGAC GGTTAAAATA CGTAACCGCT ACGACGCCAG CGTACCCATG
GTAGTGGGCC CCGTGACTCG GCAAAAACCG GTATTTGTAG AAGATGCCAA ATTCTTACGC
TCGCAAACTA AGCAACCGAT CAAATGGGCG CTGCCGGGGC CTATGACCAT GGTCGATACC
CTTTATGATG ACCATTATAA AAGTCGCGAA AAGCTCGCGT GGAAATTCGC TGAGATACTC
AATCAAGAAG CGAAAGAACT TGAAGCCGCA GGTGTGGATA TTATCCAATT TGACGAGCCG
GCGTTTAATG TCTTTTTTGA TGAGGTTAAT GATTGGGGTA TAGCCGCGTT AGAGCGCGCA
GTAGAGGGGC TTGAATGCCA AACTGCAGTC CATATTTGTT ATGGCTACGG CATTAAAGCC
AATACCGATT GGAAAAAGAC CTTAGGGACA CAGTGGCGAC AGTACGAAGA GATTTTCCCT
AAGCTACAAT CATCCAATAT CGATATTATT TCATTGGAGT GCCAAAACTC CCGAGTGCCC
ATGGAATTAA TCGGGCTACT TCGTGGCAAG AAAGTCATGG TAGGGGCCAT TGATGTGGCA
ACCAATACCA TAGAAACTCC AGAAGAGGTG GCCGATACCC TTCGAAACGC ACTGCAGTAT
GTTGATGCCG AAAATCTTTA TCCGTGCACC AACTGCGGCA TGGTGCCTTT ATCCCAGGAG
GTAACAAGCG CTAAGCTGAA TGCGTTAAGC GCCGGCACTG AGATTATTCG CAAAGAACTC
TCGGCTTAG
|
|---|
| Protein sequence | MKTLLPITIA GSLPKPSWLA QPETLWSPWK LQDDELVQGK QDALRLSLLN QQQAGINIIS
DGEQSRQHFV TTFIEHLSGV DFENRKTVKI RNRYDASVPM VVGPVTRQKP VFVEDAKFLR
SQTKQPIKWA LPGPMTMVDT LYDDHYKSRE KLAWKFAEIL NQEAKELEAA GVDIIQFDEP
AFNVFFDEVN DWGIAALERA VEGLECQTAV HICYGYGIKA NTDWKKTLGT QWRQYEEIFP
KLQSSNIDII SLECQNSRVP MELIGLLRGK KVMVGAIDVA TNTIETPEEV ADTLRNALQY
VDAENLYPCT NCGMVPLSQE VTSAKLNALS AGTEIIRKEL SA
|
|---|
| |