Gene HS_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1226 
SymbolmetE 
ID4240729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1386244 
End bp1387275 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content41% 
IMG OID638104791 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_719438 
Protein GI113461369 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.406716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA TTCTTCTCCC AACCTCTACA GCTGGTAGTC TTCCAAAACC GGTGTGGCTT 
GCTGAACCTG AAAAACTTTG GTCTGAATGG AAATGTCAGG GCAATGAACT TTTTCAAGCT
AAAAGAGATG CACTATTAGT TTCCCTTGCT GAACAAGTTG CAGCAGGGAT TGATATTATC
AGCGATGGTG AACAAACTCG TCAGCACTTT GTGACTACAT TTATTGAGCA TTTAGAGGGC
GTAGATTTCA ATAAGCGTAA AACAGTGCGT ATCCGTAACC GCTATGATGC AAACGTACCA
AGCGTAATTG GTGAAGTTTC TCGTCCAAGC TCCGTATTTG TAGACGATGC AAAATTCTTA
CGCAAGCATA CTGATAAGCC GATTAAATGG GCATTACCCG GTCCAATGAC AATGATAGAT
ACATTATATG ATGCACATTA CAAAAGTCGT GAAAAGTTAG CATGGGAATT TGCCAAAATT
TTAAATGAAG AAGCGAAAGA GCTGGAAGCA GCAGGTGTAG ACATTATTCA GTTTGACGAA
CCCGCGTTCA ATGTATTCTT TGACGAATTG AATGATTGGG GCGTGGCAGC ATTGGAACGT
GCAGCGGAAG GATTAAAATG TGAAACTGCG GTGCATATTT GTTACGGTTA TGGAATTAAA
GCAAATACTG ATTGGAAACA GACTCTCGGC AGTGAATGGC GACAATATGA AGAAAGCTTC
CCGAAATTGC AACAATCGAA AATTGACATT ATTTCTTTAG AGTGCCAAAA TTCTTGTGTA
CCTATGGAAC TGATTGAGCT GGTGAGAGGT AAAAAAGTGA TGCTTGGTGC GATTGATGTA
GCAACCAATA TCATAGAAAC ACCTGAACAA GTAGCGGATA TTTTGCGTAA AGCACTACAA
TTTGTAGACG CAAAAAATCT TTATCCTTGT ACTAACTGCG GTATGGCACC GCTCTCACGT
CAAGTTGCAA ACAGTAAGCT CAATGCGTTA AGTCAAGGTG CGGCAATTAT TCGAGCAGAA
TTAGCAGGTT AA
 
Protein sequence
MSKILLPTST AGSLPKPVWL AEPEKLWSEW KCQGNELFQA KRDALLVSLA EQVAAGIDII 
SDGEQTRQHF VTTFIEHLEG VDFNKRKTVR IRNRYDANVP SVIGEVSRPS SVFVDDAKFL
RKHTDKPIKW ALPGPMTMID TLYDAHYKSR EKLAWEFAKI LNEEAKELEA AGVDIIQFDE
PAFNVFFDEL NDWGVAALER AAEGLKCETA VHICYGYGIK ANTDWKQTLG SEWRQYEESF
PKLQQSKIDI ISLECQNSCV PMELIELVRG KKVMLGAIDV ATNIIETPEQ VADILRKALQ
FVDAKNLYPC TNCGMAPLSR QVANSKLNAL SQGAAIIRAE LAG