Gene Jden_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0200 
Symbol 
ID8379395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp217203 
End bp218411 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content60% 
IMG OID645002934 
ProductMethionine synthase vitamin-B12 independent 
Protein accessionYP_003160177 
Protein GI256831450 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACA CCGTTGATTC CATTCCTGTG TCCCACGCCG GGTCCTTGCC CCGCACCCCT 
GAACTCCTTG CCGCCAACGC GGCCATAGAA GCCGGCGAAC CCACCGACGC CATCAACGAG
TTGCGCACCG CAGCAGTCGT GGACATCGTC AAACGCCAGC AAGACCTTGG CGTCACCCTG
CCTGGTGATG GCGAATACGG AAAGTCCATG TCAACAGCGG TGGACTACGG CGCCTGGTGG
AGTTACTCGT TTTCCCGCAC TGGTGGCCTT GCCCTCGACG AAGACCAACA GTGGCTCACC
ACCGACGTCC AATCCACTCC CGGCAACATC CGCACCACCG GGTTTGGGCA CCGCCGCGAC
CAAGCCGCTT TCCGCGAGGC GTACACCGAC CCCGAATCAG GCATTTTCTC CGGTGGCGCA
CCCAAACTGT TCCCCAAAGT TGTGGACAAA CTTACCTACA CCGGGCACGA CGCTGTGGCC
ACAGACATCG CAAACCTGAA AGCCGGTTTA GCGGCAACTG GCCTAGAACA AGGGTTCATC
ACCTCCATCG CTCCCGGCTC GGCAATGCGC ATCGGAAATG ACCACTACTC CAGCGACGAG
GAACTCGTAT ACGCGTGGGC TGACGTGTTG CGTGAGGAAT ACGTCGCCAT TGTTGAAGCC
GGGCTCATTG TGCAAATTGA TGACCCGTCC CTGGCGGAAA ACTGGGACCA AATCACCCCA
GAACCTTCCA TCGAGGACTA CCTTGCGTTC TCACGGCTAC GCATTGAGGC GCTCAACCAC
GCGCTACGCG GGCTCCCAGA AGAACAGATT CGCTACCACC TGTGCTGGGG TTCTTGGCAC
GGCCCACACA CAACGGACCT TGAGTTCCGG CACATCGTGG ACACCATGCT GACGGTCAAC
GCTGGTTCAT ACTCTTTCGA GGCCGGGAAT GTTCGCCACG AACACGAGTA CACGGTGTGG
GATGACATCA CTCTGCCCGA GGGGAAAATC CTTGTGCCCG GTGTGGTGTC CCACGCAACG
AACGTGGTGG AACACCCTGA CCTCGTTGCG GAACGCATCA CCCGGTTCGC CACCCGGGTT
GGACGCGATA ACGTCATTGC GTCCACGGAC TGCGGTCTTG GTGGGCGCAT CCACCCACAA
ATCGCCACCG CGAAACTAGA AACACTTGCC GAGGGTGCAC GTCGCGCTAG CGCGCAACTA
TGGAAATGA
 
Protein sequence
MSHTVDSIPV SHAGSLPRTP ELLAANAAIE AGEPTDAINE LRTAAVVDIV KRQQDLGVTL 
PGDGEYGKSM STAVDYGAWW SYSFSRTGGL ALDEDQQWLT TDVQSTPGNI RTTGFGHRRD
QAAFREAYTD PESGIFSGGA PKLFPKVVDK LTYTGHDAVA TDIANLKAGL AATGLEQGFI
TSIAPGSAMR IGNDHYSSDE ELVYAWADVL REEYVAIVEA GLIVQIDDPS LAENWDQITP
EPSIEDYLAF SRLRIEALNH ALRGLPEEQI RYHLCWGSWH GPHTTDLEFR HIVDTMLTVN
AGSYSFEAGN VRHEHEYTVW DDITLPEGKI LVPGVVSHAT NVVEHPDLVA ERITRFATRV
GRDNVIASTD CGLGGRIHPQ IATAKLETLA EGARRASAQL WK