Gene Shew185_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3141 
Symbol 
ID5371870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3746179 
End bp3747258 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content45% 
IMG OID640831395 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_001367335 
Protein GI153001654 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC TACTTAATAA AACACCGCTT AACAAAACAT TGCTTAACCA AACCCTGTTA 
CCGACTTCAA CGGCAGGCAG TTTGCCTAAA CCTGTGTGGC TGGCAGAGCC TCAAACACTT
TGGTCTCCTT GGAAATTACA AGGCGAGGAA TTAATTGCAG GTAAACACGA TGCACTGCGT
TTGTCATTGC AGGATCAACT ACACGCTGGG ATTGATATTG TCAGTGATGG CGAGCAAACG
CGGCAACATT TTGTCACTAC CTTTATTGAG CACCTCAACG GCGTTGATTT TTCAAAACGT
AAAACCGTTA AAATTCGTGA TCGCTATGAT GCGAGTGTAC CTACGGTTGT TGGCCCAGTG
AGTCGCCAAA AGTCCGTGTT TGTTGAAGAT GCCAAATTTT TACGCAAGCA AACCACTCAA
CCGATTAAAT GGGCGCTGCC TGGCCCAATG ACCATGATAG ATACGCTTTA TGATGACCAT
TATAAAAGTC GCGAAAAGCT TGCGTGGGAA TTTGCCAAAA TTCTTAATGA GGAAGCCAAA
GAATTAGAAG CGGCGGGGGT TGATATTATC CAATTTGATG AGCCTGCCTT TAATGTGTTT
TTTGATGAGG TAAACGAGTG GGGCATTGCC TGTTTAGAGC GAGCCATTGA AGGGCTTAAA
TGCGAAACGG CGGTGCATAT TTGTTATGGT TATGGCATCA AAGCCAATAC AGATTGGAAA
AAAACCTTAG GGTCAGAGTG GCGACAATAT GAAGAAGCAT TTCCTAAACT GCAAAAGTCT
AATATCGATA TCATCTCGCT AGAATGTCAC AACTCCCATG TGCCAATGGA GCTACTTGAA
CTCATTCGCG GTAAAAAAGT CATGGTCGGC GCGATTGATG TTGCCACCGA CACGATTGAA
ACCGCAGAGG AAGTGGCTGA CACCCTACGA AAAGCCCTTA AATTTGTCGA TGCTGACAAG
CTCTATCCTT GTACCAACTG CGGCATGACG CCTTTATCTC ATCAAGTCGC AAGAGGCAAG
CTCAATGCCT TGAGTGCAGG CGCAGAGATC GTCAGAAAAG AACTCTTGGC ATTAAGATAA
 
Protein sequence
MTTLLNKTPL NKTLLNQTLL PTSTAGSLPK PVWLAEPQTL WSPWKLQGEE LIAGKHDALR 
LSLQDQLHAG IDIVSDGEQT RQHFVTTFIE HLNGVDFSKR KTVKIRDRYD ASVPTVVGPV
SRQKSVFVED AKFLRKQTTQ PIKWALPGPM TMIDTLYDDH YKSREKLAWE FAKILNEEAK
ELEAAGVDII QFDEPAFNVF FDEVNEWGIA CLERAIEGLK CETAVHICYG YGIKANTDWK
KTLGSEWRQY EEAFPKLQKS NIDIISLECH NSHVPMELLE LIRGKKVMVG AIDVATDTIE
TAEEVADTLR KALKFVDADK LYPCTNCGMT PLSHQVARGK LNALSAGAEI VRKELLALR