| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1464 |
|---|
| Symbol | |
|---|
| ID | 8132403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1713734 |
|---|
| End bp | 1714765 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644864754 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_003017046 |
|---|
| Protein GI | 253687856 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TATTACCTAC TTCAACGGCT GGCAGTTTAC CTAAACCCTC TTGGCTGGCG
CAGCCTGAAA CCCTTTGGTC CCCTTGGAAA TTGCAAGGTG AGGAATTGAT CGAGGGCAAA
CAAGATGCGC TACGCTTGAG CCTGGCAGAT CAACTACAGG CAGGGATTGA CATTGTCAGC
GACGGCGAGC AAACGCGCCA ACATTTTGTC ACGACGTTTA TTGAGCACCT CAGCGGTGTT
GATTTCGAGA AACGTGAGAT CGTTAAAATC CGTAATCGCT ATGACGCAAG TGTGCCGACA
GTCATCGGTG CTGTGGTGCG CCAAAAGCCC GTTTTTGTTG AAGACGCCAA ATTTTTACGT
CAGCACACTA CGCAACCCAT TAAATGGGCT CTGCCTGGTC CCATGACGAT GATCGACACA
CTCTATGATA GCCACTATAA AAGTCGCGAA AAACTCGCCT GGGAATTCGC CACCATTCTT
AATCAAGAAG CTAAAGAGTT GGAAGCAGCT GGCGTCGATA TTATCCAATT TGATGAGCCT
GCCTTTAATG TGTTTTTTGA TGAGGTGAAC GATTGGGGAA TTGCCGCTTT AGAAAGAGCC
GTTGAAGGGC TTAAATGTGA AACTGCGGTA CATATTTGCT ATGGCTATGG CATCAAAGCC
AATACCGATT GGAAAAAGAC GCTGGGATCC GAGTGGCGTC AATATGAAGA AATTTTTCCT
AAGCTGCAAA AATCGGCTAT CGATATCATT TCACTGGAAT GTCAGAACTC TCGCGTTCCA
ATGGATCTGA TTGAACTCAT TCGCGGTAAA AAAGTGATGG TAGGCGCCAT TGACGTGGCG
ACCAATACCA TTGAGACGCC GGAAGAAGTC GCCGATACTT TACGAAAAGC GCTTCAGTTT
GTGGATGCTG ACAAGCTCTA TCCGTCAACC AACTGCGGTA TGGCTCCGTT ATCTCGTCGA
GTCGCAAGGG GCAAGCTACA CGCGTTAAGC GCAGGCGCAG AAATCGTCCG AAGAGAACTG
TTGGCTAAAT AA
|
|---|
| Protein sequence | MKILLPTSTA GSLPKPSWLA QPETLWSPWK LQGEELIEGK QDALRLSLAD QLQAGIDIVS
DGEQTRQHFV TTFIEHLSGV DFEKREIVKI RNRYDASVPT VIGAVVRQKP VFVEDAKFLR
QHTTQPIKWA LPGPMTMIDT LYDSHYKSRE KLAWEFATIL NQEAKELEAA GVDIIQFDEP
AFNVFFDEVN DWGIAALERA VEGLKCETAV HICYGYGIKA NTDWKKTLGS EWRQYEEIFP
KLQKSAIDII SLECQNSRVP MDLIELIRGK KVMVGAIDVA TNTIETPEEV ADTLRKALQF
VDADKLYPST NCGMAPLSRR VARGKLHALS AGAEIVRREL LAK
|
|---|
| |