| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2762 |
|---|
| Symbol | |
|---|
| ID | 5080829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3200255 |
|---|
| End bp | 3201319 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499956 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_001184280 |
|---|
| Protein GI | 146293856 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC GACTTAATAA AACATCGCTT AACCAGGCAC TGTTACCTAC TTCAACTGCG
GGCAGTTTGC CTAAACCTTT ATGGCTTGCA GAGCCTGAAA CACTTTGGTC TCCATGGAAA
TTGCAAGGAG AGGAATTAAT TACCGGTAAA CACGATGCAC TGCGTTTGTC ATTACAGGAT
CAACAGCTAG CAGGGATTGA TATTGTCAGT GATGGCGAGC AAACGCGGCA ACATTTTGTC
ACTACCTTTA TTGAGCACCT TAACGGCGTT GATTTTTCAA AACGTAAAAT CGTTAAAATT
CGTGATCGCT ATGATGCGAG CGTGCCCACG GTTGTCGGCC CAGTGAGCCG CCAAAAGTCG
GTGTTTGTTG AGGATGCTAA ATTTTTACGC AAGCAAACCA CGCAACCGAT TAAATGGGCT
CTGCCTGGCC CAATGACCAT GATAGATACG CTTTATGATG ACCATTATAA AAGTCGCGAA
AAGCTCGCTT GGGAATTTGC CAAAATTCTT AATGAGGAAG CCAAAGAATT AGAAGCGGCG
GGTGTTGATA TTATCCAATT TGATGAGCCT GCCTTTAATG TATTTTTTGA TGAGGTAAAC
GATTGGGGTA TTGCGTGTTT AGAAAGAGCC ATTGAAGGGC TTAAATGCGA AACGGCGGTG
CATATTTGTT ATGGTTACGG CATTAAAGCC AATACAGATT GGAAAAAAAC CTTGGGCTCA
GAGTGGCGCC AATATGAAGA AGTGTTTCCT AAGCTGCAAA AGTCTAATAT TGATATTATT
TCGCTAGAAT GCCACAACTC CCATGTGCCA ATGGAGCTAC TTGAACTCAT TCGCGGTAAG
AAAGTCATGG TCGGCGCGAT TGATGTCGCC ACCGACACGA TTGAAACCGC AGAGGAAGTC
GCTGACACCC TACGAAAAGC CCTTAAATTT GTCGATGCCG ACAAGCTCTA TCCTTGTACC
AACTGCGGCA TGACGCCTTT ATCCCATCAA GTCACAAGAG GTAAACTCAA CGCCTTGAGT
GCAGGTGCTG AGATCGTCAG AAAAGAGCTC TTGGCATTAA GATAA
|
|---|
| Protein sequence | MKTRLNKTSL NQALLPTSTA GSLPKPLWLA EPETLWSPWK LQGEELITGK HDALRLSLQD
QQLAGIDIVS DGEQTRQHFV TTFIEHLNGV DFSKRKIVKI RDRYDASVPT VVGPVSRQKS
VFVEDAKFLR KQTTQPIKWA LPGPMTMIDT LYDDHYKSRE KLAWEFAKIL NEEAKELEAA
GVDIIQFDEP AFNVFFDEVN DWGIACLERA IEGLKCETAV HICYGYGIKA NTDWKKTLGS
EWRQYEEVFP KLQKSNIDII SLECHNSHVP MELLELIRGK KVMVGAIDVA TDTIETAEEV
ADTLRKALKF VDADKLYPCT NCGMTPLSHQ VTRGKLNALS AGAEIVRKEL LALR
|
|---|
| |