| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4458 |
|---|
| Symbol | |
|---|
| ID | 6118814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5394574 |
|---|
| End bp | 5395602 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641636021 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_001762805 |
|---|
| Protein GI | 170728779 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TATTACCTAC CTCTACAGCA GGCAGTTTGC CTAAGCCCTC TTGGCTGGCA
CAACCTGAAA CACTTTGGTC ACCTTGGAAA TTAGAGGGTG AGGCATTGAT TGATGGCAAA
CACGATGCGC TGCGTGTGTC GCTGCAAGAG CAGCAGCAAT CTGGCGTTGA TATTGTCAGT
GATGGCGAGC AAACACGGCA GCACTTTGTC ACAACCTTTA TTGAACATTT AAGTGGTGTC
GACTTTGAGA ATCGTAAAAC CGTTAGGATC CGTGATCGCT ATGACGCCAG CGTACCGACG
ATTGTCGGGC CTATCTCTCG TCAAAAGCCT GTCTTTGTTG AAGATGCTAA GTTTTTACGT
CAGCAAACCA AGCAACCGAT TAAATGGGCT TTGCCAGGTC CAATGACCAT GATTGATACG
CTGTATGACG ATCATTATCA AAGCCGTGAG CAACTCGCTT GGGAGTTCGC CAAAATTCTT
AATCAAGAAG CCAAAGAGTT AGAAGCAGCT GGGGTGGATA TCATCCAGTT TGATGAGCCT
GCGTTTAATG TATTTTTTGA TGAGGTTAAC GACTGGGGAA TTGCCTGTTT AGAGCGAGCA
ATAGAGGGGC TTAAATGCGA AACCGCGGTA CACATCTGTT ATGGCTATGG CATTAAAGCC
AATACCGATT GGAAAAAGAC CTTGGGCACA GAGTGGCGCC AATATGAAGA GGTTTTTCCT
AAACTGCAAC AGTCTAGTAT CGATATTATC TCGTTAGAGT GTCATAACTC CCATGTGCCT
ATTGAGCTAC TTGAGTTAAT TCGTGGTAAA AAAGTGATGG TAGGTGCTAT TGATGTGGCA
AGCGATACCA TTGAAACGCC AGAGGAGGTC GCTAATACCC TGCGAAAAGC ACTTGAGTTT
GTCGATGCCG ATAAGCTTTA CCCTTGCACT AACTGTGGTA TGGCACCTTT ATCTCGTCGA
GTGGCAAGAG ATAAGCTAAA TGCCCTAAGC GCTGGGGCTG CAATCGTCCG CAAAGAACTT
TTGGCTTAG
|
|---|
| Protein sequence | MKTLLPTSTA GSLPKPSWLA QPETLWSPWK LEGEALIDGK HDALRVSLQE QQQSGVDIVS
DGEQTRQHFV TTFIEHLSGV DFENRKTVRI RDRYDASVPT IVGPISRQKP VFVEDAKFLR
QQTKQPIKWA LPGPMTMIDT LYDDHYQSRE QLAWEFAKIL NQEAKELEAA GVDIIQFDEP
AFNVFFDEVN DWGIACLERA IEGLKCETAV HICYGYGIKA NTDWKKTLGT EWRQYEEVFP
KLQQSSIDII SLECHNSHVP IELLELIRGK KVMVGAIDVA SDTIETPEEV ANTLRKALEF
VDADKLYPCT NCGMAPLSRR VARDKLNALS AGAAIVRKEL LA
|
|---|
| |