Gene Rmar_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0427 
Symbol 
ID8567061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp468901 
End bp471225 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content68% 
IMG OID 
Product5-methyltetrahydropteroyltriglutamate/ homocystei neS-methyltransferase 
Protein accessionYP_003289717 
Protein GI268315998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAGG CAACGAATCT TGGTTTTCCC CGCATCGGGC TTGCGCGTGA ACTGAAGTGG 
GCCGTCGAGG GCTACTGGGC CGGACGGGTC TCGGAAAACG AATTGCTGGA GACGGCACGC
CGGCTTCGCG CCCGCCACTG GCAATGGCAA CAGGAGGCCG GGCTCGATCA GATTCCCTCG
AACGACTTCT CGCTCTACGA CCACGTGCTC GACACGATCG CGCTCGTGGG CGCCGTGCCC
GAACGCTTTG GCTGGCGCGG CGATTCCGTC GATCTGGCCA CCTACTTTGC CATGGCCCGG
GGCGTGCAGG AAAAAGAGCT GGAAGCGCGG GGACTGGAAG GCACCGGCGT GCCGCCGCTG
GAAATGACGA AGTGGTTCGA TACGAACTAT CACTACCTGG TGCCCGAATT CCACCCGGAG
CAGCGCTTCC GGCTCGCCTC CACAAAACCC ATCGATGAAT ACCTGGAGGC GAAGGCGCTG
GGCATCGAAA CGCGGCCGGT GTTGCTGGGC CCGGTCTCGT TCCTGCTGCT GGGCCGGGCG
ACGGTGACGC ACTTCGACCC GCTGACACTG CTCGATCGCC TGCTGCCCGT TTATGCCGAA
GTGCTGCGCC GGTTGAAGGC GGCCGGCGCC CGCTACGTGC AGATGGACGA GCCCTGTCTG
GTGCGCGATC TGCCGCCCGG TGCCCGACAG GCCTATCAGC AGGCCTACGC GGCGCTGAGC
CGGCCCGAAC ATCCGGCGCT GGTGCTGACC ACCTATTTCG GCGGCCTCGA AGAAAACCTG
CCGCTGGCAC GCTCGCTGCC GGTGGCGGCC GTCCACCTCG ACCTGGTGCG CGCGCCTGAG
CAGCTCGAGC CAGCCCTGGC CCACCTGCCC GAAGACCGCA TCCTCTCGCT GGGGCTGGTG
GACGGCCGCA ACGTCTGGCG CACCGACCTC GACGTGGCCG CTTCCATGCT GCGGCGGGCC
GTCGATGCCC TCGGCCGCGA ACGGGTCTGG ATCGGTCCCT CCTGCTCGCT GCTGCACGTG
CCGATCGATC TGGACGCCGA AGCCGAACTC GACCCGGAAA TCCGTCCCTG GCTGGCCTTC
GCCCGCCAGA AGCTGGACGA GCTGGTCACG CTCAAACGCC TGATCAACGA GGGCGAGGCG
GCCGCAGGCG ATCGACTCGA GACCGCCCGC CGGGCGCGCC AGGAACGTCT GACCTCTCCG
CGTCGGATCG ATCCGGAAGT GCAGCGGCGC CTGGCCGCGC TTTCGTCCGA GATGACCCGC
CGGGGCCGTC CTTTTGCCGA GCGCTACGCG CTGCAGCGCG CGCGGCTGAA GCTGCCGCTG
CTGCCCACCA CCACGATCGG CTCGTTCCCC CAGACCGACG AACTGCGCCG GAAGCGTGCG
GCCTTTCGGC GGGGCGAGCT GTCCCGGGAG GTCTACGAGC AATTCCTGGA AGCCACTATC
GCCGAGACGA TCGCCCGCCA GGAGGCCATC GGGCTGGACG TGCTCGTGCA CGGCGAGCCC
GAACGCTCCG ACATGGTGGA GTACTTCGCC GAGCAGCTTC AGGGCTTTCT GGTCACGCGC
AACGGCTGGG TGCAGAGCTA CGGCACGCGC TGCGTGCGCC CGCCCATCCT CTACGGCGAC
GTGGCGCGGC GCGGCCCCAT GACCGTACGC TGGACTACCT TTGCGCAACG CTGCACCGCA
CGCCCGGTCA AAGGCATCCT GACCGGCCCC GTGACGATCC TGCAGTGGTC CTTTGTGCGC
GACGATCAGC CCCGGGCCGA CACCTGCCGC CAGATCGCGC TGGCACTCCG CGACGAGGTG
GCCGACCTCG AAGCCGCCGG CATTTCCGTC ATCCAGATCG ACGAACCGGC CCTGCGCGAG
GGACTTCCCC TGCGCCGCCG CGACTGGCCT GCCTACCTCG AATGGGCCGT CGAATGCTTC
CGCCTTGCCT CCTGCGTCGT GCGCGACGAG ACCCAGATCC ACACGCACAT GTGCTACGCC
GACTTCGAGG ACATCCTGGA GGCCATCGCC GCGCTCGACG CCGACGTGAT CTCCATCGAG
GCGGCGCGCT CGCGCATGGC ATTGCTGGAC GCCTTCCGGC GCTTCCGCTA CCCAAACGCC
ATCGGTCCCG GCGTGTACGA CATCCATTCA CCGCGCGTGC CCTCGGTGGA AGAAATCGAG
GCGTTGCTGA AACGCGCGCT GGAGGTGATC CCGGCCGAGC GGCTGTGGGT CAACCCCGAT
TGCGGCCTCA AGACGCGCCG CTGGGCCGAA GTCGAGCCTG CCCTGCGCCA CATGGTGGAA
GCCGCCCGCC GCCTGCGTGC CCGCGTAACG GCCGAGGCCA CGTGA
 
Protein sequence
MIQATNLGFP RIGLARELKW AVEGYWAGRV SENELLETAR RLRARHWQWQ QEAGLDQIPS 
NDFSLYDHVL DTIALVGAVP ERFGWRGDSV DLATYFAMAR GVQEKELEAR GLEGTGVPPL
EMTKWFDTNY HYLVPEFHPE QRFRLASTKP IDEYLEAKAL GIETRPVLLG PVSFLLLGRA
TVTHFDPLTL LDRLLPVYAE VLRRLKAAGA RYVQMDEPCL VRDLPPGARQ AYQQAYAALS
RPEHPALVLT TYFGGLEENL PLARSLPVAA VHLDLVRAPE QLEPALAHLP EDRILSLGLV
DGRNVWRTDL DVAASMLRRA VDALGRERVW IGPSCSLLHV PIDLDAEAEL DPEIRPWLAF
ARQKLDELVT LKRLINEGEA AAGDRLETAR RARQERLTSP RRIDPEVQRR LAALSSEMTR
RGRPFAERYA LQRARLKLPL LPTTTIGSFP QTDELRRKRA AFRRGELSRE VYEQFLEATI
AETIARQEAI GLDVLVHGEP ERSDMVEYFA EQLQGFLVTR NGWVQSYGTR CVRPPILYGD
VARRGPMTVR WTTFAQRCTA RPVKGILTGP VTILQWSFVR DDQPRADTCR QIALALRDEV
ADLEAAGISV IQIDEPALRE GLPLRRRDWP AYLEWAVECF RLASCVVRDE TQIHTHMCYA
DFEDILEAIA ALDADVISIE AARSRMALLD AFRRFRYPNA IGPGVYDIHS PRVPSVEEIE
ALLKRALEVI PAERLWVNPD CGLKTRRWAE VEPALRHMVE AARRLRARVT AEAT