35 homologs were found in PanDaTox collection
for query gene Patl_3142 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_3142  hypothetical protein  100 
 
 		 626 aa  1280    Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_3071  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  42.29 
 
 		 610 aa  489  1e-137  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_39200  hypothetical protein  41.69 
 
 		 610 aa  488  1e-136  Azotobacter vinelandii DJ  Bacteria  normal  0.320982  n/a   
 
 
-
 
NC_002977  MCA1563  hypothetical protein  42.07 
 
 		 622 aa  479  1e-134  Methylococcus capsulatus str. Bath  Bacteria  normal  0.348161  n/a   
 
 
-
 
NC_009656  PSPA7_1469  hypothetical protein  42.45 
 
 		 614 aa  476  1e-133  Pseudomonas aeruginosa PA7  Bacteria  normal  0.662895  n/a   
 
 
-
 
NC_008463  PA14_16890  putative auxiliary component of ABC transporter  42.43 
 
 		 615 aa  468  9.999999999999999e-131  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1399  ABC-type uncharacterized transport system involved in gliding motility auxiliary component protein  34.08 
 
 		 646 aa  387  1e-106  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.57373  normal  1 
 
 
-
 
NC_008463  PA14_11600  ABC transporter  36.54 
 
 		 600 aa  345  2e-93  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1066  hypothetical protein  36.07 
 
 		 600 aa  342  1e-92  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_4185  hypothetical protein  33.28 
 
 		 643 aa  304  3.0000000000000004e-81  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_2907  hypothetical protein  29.8 
 
 		 614 aa  266  8.999999999999999e-70  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_2203  ABC-type uncharacterized transport system involved in gliding motility, auxiliary component-like protein  25.3 
 
 		 891 aa  125  3e-27  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.775873  n/a   
 
 
-
 
NC_013730  Slin_4905  gliding-associated putative ABC transporter substrate-binding component GldG  23.76 
 
 		 555 aa  77.4  0.0000000000008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_1768  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  22.65 
 
 		 508 aa  69.7  0.0000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0983  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  24.91 
 
 		 462 aa  64.3  0.000000007  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2807  hypothetical protein  25.08 
 
 		 580 aa  63.2  0.00000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0625078  normal  0.688312 
 
 
-
 
NC_013037  Dfer_3719  gliding motility protein, ABC-related protein  22.14 
 
 		 550 aa  61.2  0.00000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4232  hypothetical protein  24.66 
 
 		 630 aa  60.1  0.0000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_4389  hypothetical protein  24.64 
 
 		 703 aa  58.9  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0446435 
 
 
-
 
NC_008255  CHU_1547  gliding motility protein, ABC-related protein  19.44 
 
 		 557 aa  58.5  0.0000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00000000436101  normal  1 
 
 
-
 
NC_013161  Cyan8802_1048  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  22.34 
 
 		 603 aa  58.5  0.0000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.110621  unclonable  0.00000000484608 
 
 
-
 
NC_010830  Aasi_0220  hypothetical protein  22.61 
 
 		 561 aa  58.2  0.0000004  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.447855 
 
 
-
 
NC_011726  PCC8801_1019  hypothetical protein  22.34 
 
 		 603 aa  58.5  0.0000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_2141  ABC transporter, inner membrane protein  33.64 
 
 		 972 aa  58.5  0.0000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0919791  n/a   
 
 
-
 
NC_013440  Hoch_5379  ABC-type uncharacterized transport system  33.96 
 
 		 998 aa  55.8  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_2841  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  22.84 
 
 		 977 aa  56.2  0.000002  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00280772  normal  0.38274 
 
 
-
 
NC_011884  Cyan7425_4025  hypothetical protein  27.56 
 
 		 517 aa  55.5  0.000003  Cyanothece sp. PCC 7425  Bacteria  normal  1  hitchhiker  0.00023006 
 
 
-
 
NC_010655  Amuc_0005  hypothetical protein  36.54 
 
 		 523 aa  54.7  0.000005  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.206267  normal  1 
 
 
-
 
NC_013132  Cpin_0232  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  26.46 
 
 		 566 aa  53.9  0.000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_0375  ABC transporter, inner membrane protein  27.44 
 
 		 964 aa  53.9  0.00001  Magnetococcus sp. MC-1  Bacteria  normal  0.0792117  normal  1 
 
 
-
 
NC_008554  Sfum_1753  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  21.89 
 
 		 481 aa  48.5  0.0003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.424796  normal  0.0791157 
 
 
-
 
NC_009441  Fjoh_2721  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  22.04 
 
 		 561 aa  48.1  0.0005  Flavobacterium johnsoniae UW101  Bacteria  normal  0.624688  n/a   
 
 
-
 
NC_014150  Bmur_2608  ABC-type uncharacterized transport system  26.9 
 
 		 678 aa  48.1  0.0005  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00018467  n/a   
 
 
-
 
NC_014248  Aazo_2427  ABC-type uncharacterized transporter  21.11 
 
 		 547 aa  46.6  0.001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2068  ABC-type transport system protein involved in gliding motility auxiliary component-like protein  31.3 
 
 		 729 aa  45.8  0.002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.232799  n/a   
 
 
-
 
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