| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3071 |
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| Symbol | |
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| ID | 5107394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3397241 |
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| End bp | 3399073 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504328 |
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| Product | ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein |
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| Protein accession | YP_001188557 |
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| Protein GI | 146308092 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGATCTATTC CGGCGCCGGG CTGCTGCTGA TCGCGGTGGC CTTTCTCGCC
TTCAACCTGC TGGCCGGCCT CGGCCTGGGC GGTGCGCGCC TGGACCTGAC CGAGCAGAAG
CTCTACACCA TCTCCGACGG CACCAAGCAG ATCCTCGGTG AGCTGGACGA GCCAATCAAC
CTGTACTTCT TCTACTCGGA CAAGGTGGCC AAGGACCTGC CGGCGCTGCG AACTTACGCG
CAGCGTGTTG AGGAGATGCT CAAGGCCTAT CAGCGTCAGG CCGGCGGCAA GATCCGCCTG
CACGTCATCG ACCCCGAGCC GTTCTCCGAG GACGAGGACA AGGCTGCCGA ATTCGGCCTG
CAGGGCATCC CGCTGCAGCA GGGCGGTGAC TCGATCTACT TCGGCCTGGC CGGCACCAAC
GGCCTGGACG ACACCCAGGT GATCCCGTTC TTCGCTCTGG ATCAGGAAGA ACATCTGGAA
TACGAGCTGA GCCGCCTGGT GCAGACCCTG GCCAAGCCGG AACTGCCGGT GGTCGGCGTG
CTCTCCGGGC TGCAGATGAC CGGCGGCTTC GACATGATGG CGCGGCAGCC GACTCCGCCG
TGGATGGTGC TGGAGCAGGT GCGCCAGTTG TTCCAGATCG AGCAGCTCAA GGCCGACGTC
GACCTGATCC CCGAGAACGT CTCGGTGCTG TGGCTGGTGC ATCCGAAGAA CCTGCCCGAG
CAGACCCTGT ACGCCATCGA CCAGTTCGTG CTGCGCGGCG GCAAGCTGAT GGTGTTCGTC
GACCCCTATG CCGAGGCCGA TACCGGCGAT ATGCCGGGTG AGATGGCGGT GGACCGGGCG
TCCGACATCG AGCCGCTGTT CAAGGCCTGG GGCCTGCGCC TGGTGCCGGA CAAGGTGCTC
GGCGATGGCT CCTACGCCAT GTCGGTCAAC CGTGGCCAGG GGCAGCGCCC GGTGCGCCAC
GCCGCCTGGC TGAGCTTGCC GCGCAAGGCG CTGGATCAGG ATGACATCGC CACCGCCGGG
CTGGAGAGCG TCACGGTCGC CACCGCCGGC ATTCTCGAGT CGGTGGAGGG GGCGAAGACG
CGTTTCACCC CGCTGATGCA GAGCTCGGAA TACGCCATGC CCTTCGACGC CCAGCGCTTC
GCCATGCTCA GCAACCCGGA GGAGCTGATC CGTGAACTGG AGCCGACCGG CGAGCGCTAC
ACCATCGCCG CGCGCATCGA CGGTCCGGCG CAGAGCGCCT TTCCCGATGG CATCGAAGGC
CGCAAGGACG GCCTCAAGCG GGCCGACACC ATCAACGTCA TCGCCGTGGC CGACACCGAC
ATCCTCAGTG ATCGCATGTG GGTGCAGGTG CAGGAGTTCT TTGGCCAGCG CATCCCGCAA
CCCTGGGCGG ACAACGGCAG CTTCGCGATC AACGCGCTGG ACAACTTGGC CGGCTCCGAG
GCGTTGATCA GCGTGCGCTC GCGTGGTCGC TTCAGCCGCC CGTTCGTGGT GGTCGAGGAG
TTGCAGCGCG CCGCCGAACA GCGCTTCCGT GATAAGGAGC AGGCCCTGCA GGCGCGTCTG
GCCGAGACCG AGCAGCAACT GGCCGCACTG CAGCGCAGCG ACGACCCCAG CCAGGCGCTG
GAGCTGACGC CGGAGCAGCA GGGCGCGCTG CAGCGTTTCA TCCAGCAGAA GCTGGAGATT
CGCAAGGAGC TGCGCGACGT GCGCTATCAG CTCAACGCCG ATATCGAGGC GCTGGGGCGC
ACGCTGAAGA TCATCAACAT CGCCCTGGTG CCGGCGTTGC TGACTCTCGG CGTGTTGGCG
CTGTGGCTGT GGCGGCGCCG CCGTCACGCT TGA
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| Protein sequence | MKKLIYSGAG LLLIAVAFLA FNLLAGLGLG GARLDLTEQK LYTISDGTKQ ILGELDEPIN
LYFFYSDKVA KDLPALRTYA QRVEEMLKAY QRQAGGKIRL HVIDPEPFSE DEDKAAEFGL
QGIPLQQGGD SIYFGLAGTN GLDDTQVIPF FALDQEEHLE YELSRLVQTL AKPELPVVGV
LSGLQMTGGF DMMARQPTPP WMVLEQVRQL FQIEQLKADV DLIPENVSVL WLVHPKNLPE
QTLYAIDQFV LRGGKLMVFV DPYAEADTGD MPGEMAVDRA SDIEPLFKAW GLRLVPDKVL
GDGSYAMSVN RGQGQRPVRH AAWLSLPRKA LDQDDIATAG LESVTVATAG ILESVEGAKT
RFTPLMQSSE YAMPFDAQRF AMLSNPEELI RELEPTGERY TIAARIDGPA QSAFPDGIEG
RKDGLKRADT INVIAVADTD ILSDRMWVQV QEFFGQRIPQ PWADNGSFAI NALDNLAGSE
ALISVRSRGR FSRPFVVVEE LQRAAEQRFR DKEQALQARL AETEQQLAAL QRSDDPSQAL
ELTPEQQGAL QRFIQQKLEI RKELRDVRYQ LNADIEALGR TLKIINIALV PALLTLGVLA
LWLWRRRRHA
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