34 homologs were found in PanDaTox collection
for query gene Pmen_3071 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012560  Avin_39200  hypothetical protein  70.61 
 
 		 610 aa  886    Azotobacter vinelandii DJ  Bacteria  normal  0.320982  n/a   
 
 
-
 
NC_009656  PSPA7_1469  hypothetical protein  69.62 
 
 		 614 aa  876    Pseudomonas aeruginosa PA7  Bacteria  normal  0.662895  n/a   
 
 
-
 
NC_009439  Pmen_3071  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  100 
 
 		 610 aa  1226    Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_16890  putative auxiliary component of ABC transporter  70.7 
 
 		 615 aa  864    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA1563  hypothetical protein  46.61 
 
 		 622 aa  514  1e-144  Methylococcus capsulatus str. Bath  Bacteria  normal  0.348161  n/a   
 
 
-
 
NC_008463  PA14_11600  ABC transporter  50.08 
 
 		 600 aa  512  1e-144  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1066  hypothetical protein  49.84 
 
 		 600 aa  511  1e-143  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1399  ABC-type uncharacterized transport system involved in gliding motility auxiliary component protein  41.23 
 
 		 646 aa  473  1e-132  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.57373  normal  1 
 
 
-
 
NC_008228  Patl_3142  hypothetical protein  42.29 
 
 		 626 aa  467  9.999999999999999e-131  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_4185  hypothetical protein  34.31 
 
 		 643 aa  307  4.0000000000000004e-82  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_2907  hypothetical protein  33.06 
 
 		 614 aa  299  1e-79  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_2203  ABC-type uncharacterized transport system involved in gliding motility, auxiliary component-like protein  26.73 
 
 		 891 aa  155  2e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.775873  n/a   
 
 
-
 
NC_013501  Rmar_1768  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  22.24 
 
 		 508 aa  85.1  0.000000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3719  gliding motility protein, ABC-related protein  23.65 
 
 		 550 aa  81.3  0.00000000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_4905  gliding-associated putative ABC transporter substrate-binding component GldG  23.06 
 
 		 555 aa  75.5  0.000000000003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5379  ABC-type uncharacterized transport system  25.27 
 
 		 998 aa  72.4  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0232  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  22.57 
 
 		 566 aa  69.7  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_1019  hypothetical protein  21.9 
 
 		 603 aa  65.1  0.000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1048  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  21.9 
 
 		 603 aa  65.1  0.000000004  Cyanothece sp. PCC 8802  Bacteria  normal  0.110621  unclonable  0.00000000484608 
 
 
-
 
NC_008255  CHU_1547  gliding motility protein, ABC-related protein  21.33 
 
 		 557 aa  64.3  0.000000007  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00000000436101  normal  1 
 
 
-
 
NC_007912  Sde_2841  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  22.92 
 
 		 977 aa  63.9  0.000000008  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00280772  normal  0.38274 
 
 
-
 
NC_007484  Noc_2141  ABC transporter, inner membrane protein  35.65 
 
 		 972 aa  63.2  0.00000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0919791  n/a   
 
 
-
 
NC_010830  Aasi_0220  hypothetical protein  23.54 
 
 		 561 aa  62  0.00000003  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.447855 
 
 
-
 
NC_013061  Phep_3236  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  20.28 
 
 		 559 aa  62  0.00000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.0923144 
 
 
-
 
NC_009441  Fjoh_2721  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  19.39 
 
 		 561 aa  55.8  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.624688  n/a   
 
 
-
 
NC_014150  Bmur_2608  ABC-type uncharacterized transport system  25.87 
 
 		 678 aa  56.2  0.000002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00018467  n/a   
 
 
-
 
NC_011728  BbuZS7_0779  hypothetical protein  19.91 
 
 		 502 aa  52.8  0.00002  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE2112  hypothetical protein  22.12 
 
 		 495 aa  52.4  0.00003  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1753  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  22.29 
 
 		 481 aa  52  0.00003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.424796  normal  0.0791157 
 
 
-
 
NC_014230  CA2559_08361  GldG  20.93 
 
 		 557 aa  50.8  0.00006  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.196642  n/a   
 
 
-
 
NC_010320  Teth514_0983  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  21.11 
 
 		 462 aa  50.4  0.0001  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_0375  ABC transporter, inner membrane protein  32.17 
 
 		 964 aa  48.5  0.0004  Magnetococcus sp. MC-1  Bacteria  normal  0.0792117  normal  1 
 
 
-
 
NC_014248  Aazo_2427  ABC-type uncharacterized transporter  22.32 
 
 		 547 aa  48.1  0.0004  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2807  hypothetical protein  33.33 
 
 		 580 aa  46.6  0.001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0625078  normal  0.688312 
 
 
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