Gene Avin_39200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39200 
Symbol 
ID7762809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3970958 
End bp3972790 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content67% 
IMG OID643806783 
Producthypothetical protein 
Protein accessionYP_002801035 
Protein GI226945962 
COG category[N] Cell motility 
COG ID[COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.320982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA TCCTTTATTC GGGCGTCGGG CTGCTGCTCA TCGCAGTGGC GTTCCTGGCC 
TTCAACGTTC TTTCCAGCCA GTTGCCGGGC AACGCCCGCC TGGATCTCAC CGAGCAGAAG
CTCTACACCC TGTCCGCCGG CACCGAGCGT ATTCTCGCCG GGCTGGAGCA GCCGCTGGAC
CTGTATTTCT TCTACTCCGA CCAGGCCACA CGCGAACTGG CGCCGCTGCG CAACTACGCC
CGGCGGGTCG AAGAGATGCT CAAGGCCTAC GAGCGGGTGG CGAACGGCAA GCTGCGCCTG
CACATCGTCG ACCCCGAGCC GTTCTCCGAG GACGAGGATC GCGCCGCCGA GTTCGGCCTG
CAGGCGGTGC CGCTGAACCA GGGCGACGAG CAGGTCTACT TCGGTCTGGC CGGACGCAAC
GCGGCGGGCA ACACCCAGGC GATCCCGTTC TTCCCGCTGG ATCAGGAGGA GTTCCTCGAA
TACGAGATCA GCCGCCTGGT GCAGGGTCTG GCGCATGCCC GCCTGCCGGT CGTCGGAGTG
CTTTCCGGGC TGCAGTTGAA CGGCGGCTTC GACATGCTCG CCGGACAGCC GACGGCGCCC
TGGATGGTGC TCGAGGAAAT TCGCCAACTG TTTCGCATCG AGAGCCTCGA GCCCGGTGTC
GACCAGATTC CCGAGGAGGT TTCGGTGCTG CTGCTGGTGC ATCCGAAGCA GTTGCCGGAG
CAGACCCTCT ATGCCATCGA TCAGTTCGTG ATGCGCGGCG GCAAGCTGCT GGCCTTCGTC
GATCCGCTCA GCGAGATCGA CAGCGGCATG AGCCTGTCCG GCGAGATGGG CGCTGGCCGG
GCATCCGATC TGGAGCCGCT GTTCAAGGCC TGGGGCGTGC GCCTGCGCCC CGCCGAGGTG
CTCGGCGACG GCGTCTATGC CATGGCCGTG AGCCTCGGCC AGGGACAGCG GGCGGTGCGC
CATCCCACCT GGCTGAACCT GCCGCCCGAA GCGCTCGATC AGCAGGACGT CACCACCGCC
GGACTGGAGA GCCTGATCGT CGCCAGCGCC GGTATCCTCG ATCCGCTGGA GGGCGCCTCG
ACCCGTTTCG TGCCGCTCAT CCAGAGTTCC ACCCATGCCA TGCCGCTGGA CGCCGAGCGC
GTCGCCGCGG TCGACGATCC GCAGAGTCTT TATGCCGATC TGCAACCGAC CGGCGAGCGT
TACGCCATTG CCGCGCGAGT CGACGGGCCG GCCAGATCGG CCTATCCGGA CGGGATCGAG
GGGCGCAAGG ACGGCATCAA GTCGGTCGAC AACATCAATC TGATCCTGGT CGCCGACAGC
GACCTGCTCA GCGACCGCAT GTGGGTGCGG ATACAGGACT TCTTCGGCCA GCGCATCCCG
CAGCCGTTCG CCGACAACGC CAGCTTCGCG ATCAACGCGC TGGACAACCT GGCCGGCTCC
GACGCGCTGA TCGAGGTACG CTCGCGCGGC CGCTTCAGCC GTCCGTTCGA GGTGGTCGAG
GCGCTGCAGC GCGAGGCGGA GGCGCGCTTC CGCGAGAAGG AGGAGGTGCT GCAGCAGCGC
CTGGAGCAGA CCGAGCGGCA GCTCGCCGCC CTGCAGCAGG GCGAGGAGCC GGGCAAGGTC
CTGGAACTGA GCCCCGAGCA GCAGGCCACC CTGCAGCAGT TCCTCCAGGA AAAGCTGCGT
ATCCGCAAGG AACTTCGCGA GGTGCGCTAC CAGTTCAATG CCGACATCGA GGCGCTCGGG
CGTACCCTCA AGTTCCTCAA TATCGCCCTG GTACCGATGC TGCTGACCCT GGGCGCGCTG
GCTGTCTGGC TGTGGCGCCG GCGGCGGGCC TGA
 
Protein sequence
MKKILYSGVG LLLIAVAFLA FNVLSSQLPG NARLDLTEQK LYTLSAGTER ILAGLEQPLD 
LYFFYSDQAT RELAPLRNYA RRVEEMLKAY ERVANGKLRL HIVDPEPFSE DEDRAAEFGL
QAVPLNQGDE QVYFGLAGRN AAGNTQAIPF FPLDQEEFLE YEISRLVQGL AHARLPVVGV
LSGLQLNGGF DMLAGQPTAP WMVLEEIRQL FRIESLEPGV DQIPEEVSVL LLVHPKQLPE
QTLYAIDQFV MRGGKLLAFV DPLSEIDSGM SLSGEMGAGR ASDLEPLFKA WGVRLRPAEV
LGDGVYAMAV SLGQGQRAVR HPTWLNLPPE ALDQQDVTTA GLESLIVASA GILDPLEGAS
TRFVPLIQSS THAMPLDAER VAAVDDPQSL YADLQPTGER YAIAARVDGP ARSAYPDGIE
GRKDGIKSVD NINLILVADS DLLSDRMWVR IQDFFGQRIP QPFADNASFA INALDNLAGS
DALIEVRSRG RFSRPFEVVE ALQREAEARF REKEEVLQQR LEQTERQLAA LQQGEEPGKV
LELSPEQQAT LQQFLQEKLR IRKELREVRY QFNADIEALG RTLKFLNIAL VPMLLTLGAL
AVWLWRRRRA