41 homologs were found in PanDaTox collection
for query gene Cpin_0232 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_0232  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  100 
 
 		 566 aa  1165    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_2721  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  35.7 
 
 		 561 aa  347  2e-94  Flavobacterium johnsoniae UW101  Bacteria  normal  0.624688  n/a   
 
 
-
 
NC_013037  Dfer_3719  gliding motility protein, ABC-related protein  35.75 
 
 		 550 aa  340  4e-92  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_3236  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  34.51 
 
 		 559 aa  329  9e-89  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.0923144 
 
 
-
 
NC_014230  CA2559_08361  GldG  36.28 
 
 		 557 aa  327  3e-88  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.196642  n/a   
 
 
-
 
NC_008255  CHU_1547  gliding motility protein, ABC-related protein  32.04 
 
 		 557 aa  320  3.9999999999999996e-86  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00000000436101  normal  1 
 
 
-
 
NC_013730  Slin_4905  gliding-associated putative ABC transporter substrate-binding component GldG  32.91 
 
 		 555 aa  295  2e-78  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010830  Aasi_0220  hypothetical protein  33.09 
 
 		 561 aa  294  3e-78  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.447855 
 
 
-
 
NC_013162  Coch_1945  gliding motility protein GldG  31.28 
 
 		 562 aa  260  5.0000000000000005e-68  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1768  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  26.99 
 
 		 508 aa  156  8e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4389  hypothetical protein  25.2 
 
 		 703 aa  91.7  4e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0446435 
 
 
-
 
NC_013161  Cyan8802_1048  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  23.29 
 
 		 603 aa  87.8  4e-16  Cyanothece sp. PCC 8802  Bacteria  normal  0.110621  unclonable  0.00000000484608 
 
 
-
 
NC_011726  PCC8801_1019  hypothetical protein  23.29 
 
 		 603 aa  87.8  4e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2807  hypothetical protein  24.24 
 
 		 580 aa  81.3  0.00000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0625078  normal  0.688312 
 
 
-
 
NC_011884  Cyan7425_4025  hypothetical protein  22.48 
 
 		 517 aa  77  0.0000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  1  hitchhiker  0.00023006 
 
 
-
 
NC_008554  Sfum_1753  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  20.79 
 
 		 481 aa  74.7  0.000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.424796  normal  0.0791157 
 
 
-
 
NC_008463  PA14_11600  ABC transporter  23.37 
 
 		 600 aa  72.4  0.00000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4232  hypothetical protein  25.91 
 
 		 630 aa  69.7  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1066  hypothetical protein  22.96 
 
 		 600 aa  68.9  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_39200  hypothetical protein  20.79 
 
 		 610 aa  69.3  0.0000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.320982  n/a   
 
 
-
 
NC_009439  Pmen_3071  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  22.39 
 
 		 610 aa  67.4  0.0000000007  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1399  ABC-type uncharacterized transport system involved in gliding motility auxiliary component protein  26.16 
 
 		 646 aa  66.6  0.000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.57373  normal  1 
 
 
-
 
NC_002977  MCA1563  hypothetical protein  21.93 
 
 		 622 aa  64.7  0.000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  0.348161  n/a   
 
 
-
 
NC_002967  TDE2112  hypothetical protein  22.38 
 
 		 495 aa  64.7  0.000000004  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_4185  hypothetical protein  27.13 
 
 		 643 aa  63.9  0.000000008  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_16890  putative auxiliary component of ABC transporter  23.75 
 
 		 615 aa  61.2  0.00000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_12990  hypothetical protein  20.28 
 
 		 498 aa  60.8  0.00000007  Halothermothrix orenii H 168  Bacteria  normal  0.846752  n/a   
 
 
-
 
NC_014150  Bmur_0102  ABC-type uncharacterized transport system  20.53 
 
 		 542 aa  60.5  0.00000009  Brachyspira murdochii DSM 12563  Bacteria  normal  0.593442  n/a   
 
 
-
 
NC_014248  Aazo_2427  ABC-type uncharacterized transporter  22.59 
 
 		 547 aa  59.7  0.0000001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_2608  ABC-type uncharacterized transport system  22.83 
 
 		 678 aa  59.7  0.0000001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00018467  n/a   
 
 
-
 
NC_009656  PSPA7_1469  hypothetical protein  22.26 
 
 		 614 aa  57  0.0000009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.662895  n/a   
 
 
-
 
NC_010320  Teth514_0983  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  24.33 
 
 		 462 aa  57  0.0000009  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2068  ABC-type transport system protein involved in gliding motility auxiliary component-like protein  26.4 
 
 		 729 aa  55.8  0.000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.232799  n/a   
 
 
-
 
NC_012034  Athe_2368  hypothetical protein  20.81 
 
 		 485 aa  55.8  0.000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_3142  hypothetical protein  26.46 
 
 		 626 aa  54.3  0.000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_2203  ABC-type uncharacterized transport system involved in gliding motility, auxiliary component-like protein  19.18 
 
 		 891 aa  52  0.00003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.775873  n/a   
 
 
-
 
NC_011898  Ccel_0297  hypothetical protein  22.76 
 
 		 475 aa  52  0.00003  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_5379  ABC-type uncharacterized transport system  20.98 
 
 		 998 aa  48.5  0.0003  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_2708  hypothetical protein  22.22 
 
 		 473 aa  46.2  0.002  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000297424  n/a   
 
 
-
 
NC_010571  Oter_0089  hypothetical protein  22.42 
 
 		 498 aa  44.7  0.004  Opitutus terrae PB90-1  Bacteria  normal  0.927452  normal  0.329867 
 
 
-
 
NC_007912  Sde_2841  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  24.52 
 
 		 977 aa  43.5  0.01  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00280772  normal  0.38274 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>