| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1399 |
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| Symbol | |
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| ID | 5454311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1530014 |
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| End bp | 1531954 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876972 |
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| Product | ABC-type uncharacterized transport system involved in gliding motility auxiliary component protein |
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| Protein accession | YP_001412676 |
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| Protein GI | 154251852 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.57373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACC AGCAGATCAG CCGTTCGGCC TACGGCATCA TCACACTGGT GCTGTTGGCG
GTTCTGTTCC TTGCCGTCAA TCTGTTCTCC AACATTGTCT TCCGGTCTGC GCGGGTCGAT
CTCACGCAAA ACAACCTCTA CACCCTGTCG GATGGAACGG ATGAGGTTGT CTCCTCGATA
GAGGAACCGA TCACGCTGCG CTTCTTCTAC TCGGAGAAAC TTGCCAACGA CTATGCGCGC
ATCCGCACCT ATGCGAGCCA TGTTCGCGAT CTGCTGGAAG AAATTCGCGC GCGGTCGGGC
GGGAACGTCC GTCTCGAAGT CATCGACCCG GAAGCCTTCT CCGAGGAGGA GGATCTCGCC
ATGTCCTTCG GCCTCAAGGG CGCGCCAACG GCGAGCGGAG ATGTTGTCTA TTTCGGCCTG
GTCGGCACGA ATTCCGTCGA TGGGCTTGAA GCGATCCCTT TCTTCACCGA TGAGCGCGAG
CAGTATCTTG AGTATGATGT CGCGCGGATG ATCCAGAACC TCAGCCGTCC GTCACGCCCG
GTACTTGGCA TCGTCACGAA CCTGCCGCTC GATACCGGTG TGGGCGGGCT GATGTCCGCC
ATGCGCGGCG AGTCGCTGCC CTTCATGATT TATGACGAGC TGCAGGACCG TTTTGAGATC
GAATTCCTGG AGCAGCAATT CCAGGCTGTG CCGGCCAAGG TCGATGTGCT GATGATCGCG
CATCCGCGTC CGCTCGATGA GCCGACGCTT TATGCAATCG ACCAGTTCGT CATGCGCGGC
GGCCACGTGC TTGCCTTCGT CGACCCTCAT TCGGAAGTGA GCCTGACGGC GGGCCCGAAC
GGCGAGCCGA TCCCCGGGTA TACGGAAGCA TCGGATCTTG GACCTCTGCT TGAAAGCTGG
GGCATCGATT ACGACCCGAC GAAGGTCGTG GGCGACCGGC AAATCGCACA ACGCGTCCGC
ACCGGGCTCG ATGCAAGGCG CCAGGAAAGC GACTATGTGA TCTGGCTCGC CGTGCCGCGC
GAGAATGTAG ACACGGACGA CCTGGTAACG GCCGACGTCT CGCGCCTCAA TCTCGGTACA
GTCGGTGCGC TCGCACAGGC GGAGGGCGCA ACCACGACCT TCTCGCCGCT CGTCACGTCG
ACGGAAGATT CGCAGCTCTA CGACATCGAG GACGTGAAAA AGGGGCCGAG ACCAGACGAT
CTATTGCGGA ATTTTACACC CACCGAGGAA CGCTACGTCA TCGCGGCGCG CATCTCCGGG
CCGGTGAAAA GTGCGTTTGA CGGGCCGCCC AGCGAAGCGC CGGTCGCGCA GCCGGGCGGT
GTCTCGCCGC GCAAGTCGCA GGAAAAAGCC GGCCCTTATA TTGCCCAGTC GCAGAGCGAT
GCGAACATCA TCGTCTTCGC CGATAGCGAT ATTTTCGACG ACCGTTTCTG GGTGCAGACG
GAATCCTATC TCGGCGAGCG CGTGGCGCAG CCGATCGCGG ATAATGCGGT GTTCATCATG
TCCGCCATCG ACAATCTGAT GGGCTCGAAT GAGCTCATTT CGCTCCGCGC GCGCAGCAAG
ATCGACAGGC CTTTTGTCGT CGTCGAGGAC TTGCGCCGGA CAGCGGAGAG ACGGTTCCTG
GCCGAACAGG ATATCCTCGA AAAGAAGATT GCCGAGACGG AACGAAGCCT TGTGGAGCTT
CAGACCAGAG GCTCGGCGGC GCCGGGCGGC CCGGCCATCG ATGAAGATGC AGAGATGCGG
AAGTTCCGTG CCGAGCTTCT CGAGAGCCGC AAAAGGCTTC GCGATGTGCA GCGCGATCTT
CGGCGCGATG TCGAGAATCT TGGCGGGCAG TTGCGTTTCG TCAACATCGC CCTTGTGCCG
ATCGTGCTCG CAATCCTCGC GCTCGGTGCG GCCTTCCTGC GTTACCGCCG TCGCAAGGCG
CGCGTCGAGA AGGGAGCGTA A
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| Protein sequence | MANQQISRSA YGIITLVLLA VLFLAVNLFS NIVFRSARVD LTQNNLYTLS DGTDEVVSSI
EEPITLRFFY SEKLANDYAR IRTYASHVRD LLEEIRARSG GNVRLEVIDP EAFSEEEDLA
MSFGLKGAPT ASGDVVYFGL VGTNSVDGLE AIPFFTDERE QYLEYDVARM IQNLSRPSRP
VLGIVTNLPL DTGVGGLMSA MRGESLPFMI YDELQDRFEI EFLEQQFQAV PAKVDVLMIA
HPRPLDEPTL YAIDQFVMRG GHVLAFVDPH SEVSLTAGPN GEPIPGYTEA SDLGPLLESW
GIDYDPTKVV GDRQIAQRVR TGLDARRQES DYVIWLAVPR ENVDTDDLVT ADVSRLNLGT
VGALAQAEGA TTTFSPLVTS TEDSQLYDIE DVKKGPRPDD LLRNFTPTEE RYVIAARISG
PVKSAFDGPP SEAPVAQPGG VSPRKSQEKA GPYIAQSQSD ANIIVFADSD IFDDRFWVQT
ESYLGERVAQ PIADNAVFIM SAIDNLMGSN ELISLRARSK IDRPFVVVED LRRTAERRFL
AEQDILEKKI AETERSLVEL QTRGSAAPGG PAIDEDAEMR KFRAELLESR KRLRDVQRDL
RRDVENLGGQ LRFVNIALVP IVLAILALGA AFLRYRRRKA RVEKGA
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