Gene MCA1563 details

Gene Information

• Locus tag: MCA1563
• ID: 3103130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1662380
• End bp: 1664248
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170734
• Product: hypothetical protein
• Protein accession: YP_114016
• Protein GI: 53804118
• COG category: [N] Cell motility
• COG ID: [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.348161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGA ATCGCAAGAC CCTGAGCGGC AGCGCGCTCG CCGTCCTGGC AGTGCTTTTC 
GTGTCCCTGA CACTGATCTC CAATGCCCTT TTCCGCGGCG TCCGGCTCGA TCTGACGGAA 
AACTCGCTGT ACACCCTGTC TGATGGAAGC CGTAACATCC TGGCGAAGCT GGATGAGCCC 
ATCCACCTGC GATTGTACTT CTCCGACAAA GCGACCGCCG AAAGCAATCG CCCCGATGTA 
CGGGGACTCC GGCTGTACTT CGACCGGGTT CGGGAAATGC TGGAAGAGAT GAGATCGCGC 
GCCGGAGGCA AAATCGAGCT CGAGGTGATC GATCCCTTGC CCTATTCAGA AGCGGAAGAC 
CGGGCGGCAG CGGCCGGACT CCAGGGTATT CCGCTCGGAC CCTCCGGGGA AAAGGTATTC 
CTCGGCCTGG AAGGCAGCAA CTCGACCGAT GGGCGGGCCA CCATCCCGTT CTTCGAGCCC 
GGTAAGGAAG CGTTTCTGGA ATACGATCTG GTCAAGCTCG TCCATGATCT GGCCACGCCG 
AAAAAACCGG TGGTGGGACT CGTTTCCAGT CTGCCTTTGG CGGGCGGCTT CGACCCGCAA 
CGCGGAGACA TGGGCGCACC CTGGACCGTC TACGAACAGC TCTCGCAATC GTTCGACGTC 
AGGTCCCTGG ACGCCGACAG CCTCAAGGCC GTCGCCCCCG AAATCGAAGT GCTGGTCGTC 
GTCCATCCCA AAAGGCTCGG CGAGGACGCC CAGTACGCCC TGGACCAGTT CGTTCTGCGA 
GGCGGGCGTC TGATGGTGTT CGTCGATCCC CATGCGGAGA ACGACGGCGT GGGCGATCCC 
CGCGATCCGA TGGCGGCCAT GGTGACTCCC AAGGCTTCTG ACCTTCCCGT CTTGTTCAAG 
GCCTGGGGGG TGGAGTACAA ACCCGATGAA GCGGTGCTGG ACCGCGCCCG TGCGGTCACG 
GTCAATACCG CCCCTGGCGC TCCTCCGAGC CGGCATCCAG CGATCCTGCG GTTGGGCAAA 
TCGGATCTGA ACGCCGCCGA CGTGATCACC GCCAACCTCG ACACCATTCA TCTCGCCAGC 
GTCGGCCACT TCAGGCCGAC GACGGACGGC GGGAGCCGGC TGACTCCCCT GCTCCAGACC 
AGCGACCAGG CCATGGTCGT CCCCGCAGAC CGCATCCGCT TCCTCGGCGA CCCCTCCAGC 
CTGCTGCAGG ACTATAAGCC GGGTGGCGAG CGCCTGATCG TCGCCGGCAG GCTGGAAGGC 
AAGTTCAAAA CCGCCTTTCC GCAACGCGGC GATCCGGGCC ACTTGGCCGA AGCCAAGGGA 
ACCGGGGAGA TACTGCTGAT AGCAGATACG GATCTGCTCA GCGACCGGCT GTGGGTCAGG 
TCTTCCAACT TCTTCGGCCG GAAGCTGCTC ACCACCTTCG CCGGCAACGG TGACCTGTTC 
ATCAATGCGG TCGACAATCT CGCCGGCAGC TCGGATCTGA TTTCGATACG GGGACGAGGC 
ACCTCGGCAC GTCCATTCAC CAAGGTCGAA GAACTCAAGG CAGCAGCGGA CGACCGCTTC 
CGCAGCAAGG AGCGGGAGCT CCAGCAGGAA CTCGGCGAAA CCGAACGGAA GCTGGCCGAG 
CTGCAAAGGG GCAAAACCGG CGACGACACC TTCGTCCTCA GCCCCGCACA GCGGAAGGAG 
CTGGATGACT TTCTCAGGCG CAAACTCGAA ATCCGCAAGG AACTGCGCGA AGTGCGGCGT 
CAACTGGATG CGGACATCGA CGCACTGGGA GCCCGGCTGA AGTTCATCGA CATCGCGCTC 
GTGCCCCTCC TGCTCACCCT GGGCACGCTG GGTTTCATCG CCTGGAACGC CAGGCGAGAA 
AAGGCTTGA 

 

Protein sequence

MTLNRKTLSG SALAVLAVLF VSLTLISNAL FRGVRLDLTE NSLYTLSDGS RNILAKLDEP 
IHLRLYFSDK ATAESNRPDV RGLRLYFDRV REMLEEMRSR AGGKIELEVI DPLPYSEAED 
RAAAAGLQGI PLGPSGEKVF LGLEGSNSTD GRATIPFFEP GKEAFLEYDL VKLVHDLATP 
KKPVVGLVSS LPLAGGFDPQ RGDMGAPWTV YEQLSQSFDV RSLDADSLKA VAPEIEVLVV 
VHPKRLGEDA QYALDQFVLR GGRLMVFVDP HAENDGVGDP RDPMAAMVTP KASDLPVLFK 
AWGVEYKPDE AVLDRARAVT VNTAPGAPPS RHPAILRLGK SDLNAADVIT ANLDTIHLAS 
VGHFRPTTDG GSRLTPLLQT SDQAMVVPAD RIRFLGDPSS LLQDYKPGGE RLIVAGRLEG 
KFKTAFPQRG DPGHLAEAKG TGEILLIADT DLLSDRLWVR SSNFFGRKLL TTFAGNGDLF 
INAVDNLAGS SDLISIRGRG TSARPFTKVE ELKAAADDRF RSKERELQQE LGETERKLAE 
LQRGKTGDDT FVLSPAQRKE LDDFLRRKLE IRKELREVRR QLDADIDALG ARLKFIDIAL 
VPLLLTLGTL GFIAWNARRE KA