Gene PA14_16890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16890 
Symbol 
ID4383361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1447684 
End bp1449531 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content67% 
IMG OID639323906 
Productputative auxiliary component of ABC transporter 
Protein accessionYP_789494 
Protein GI116051667 
COG category[N] Cell motility 
COG ID[COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG TGTTGTCCTC TGGCGCCGGG CTGTTGCTGA TCGCGCTGGC GTTCCTGGCC 
TTCAACATGG TCTCCGGCCT GCTGTTCAGC GGCGCGCGGC TCGACCTGAC CGAGCAGAAG
CTCTACACCA TCAGCCCCGG CACCAAGCGG ATCCTGGCCG GCCTCGACGA GCCGATCAAC
CTGTACTTCT TCTATTCGGA TAGCGGTGCC CGGGAACTGG TGCCGCTGCG CAACTACGCC
AGGCGCGTCG AGGAACTGCT GCGCGCCTAC GAGCGCGAGG CGAACGGCAG GATTCGCCTG
CAGGTGATCG ATCCCGAGCC GTTCTCCGAG AACGAGGACA AGGCCACCGA GTTCGGCCTG
CAAGGAATTC CCCTGCAGCA GGGCGGCGAC AACCTGTACT TCGGCCTGGC CGGCAGCAAC
GCCCTGGACG GAGTCCAGGT CATACCCTTC TTCCCGCTCG ATCAGGAGGA GTTCCTCGAA
TACGACATCA GCCGCCTGGT GCAGACCCTG GCACAGCCGC AGCGGCCGGT GGTAGGCCTG
ATGTCGTCGC TGCCGCTCAA TGGCGGCTTC GACATGGCCA GCCGGCAGCC GACCTCGCCG
TGGATGGTCA TGGAGGAAAT CCGCCAGCAA TTCGACCTGC GCAGCCTCAA GAGCGATGCC
ACGGAAATCC CGCCGGAGGT CTCGGTGCTG CTGCTGGTGC ATCCCAAGCA GTTACCCGAG
CAGACGCTAT ACGCCATCGA CCAGTTCGTC CTGCGCGGGG GCAAGCTGCT GGCGTTCGTC
GACCCCTTCA GCGAGGCCGA CAGCGGCAGC GATTTCGCCG CTACGCTGGA TGGCGACAAG
TCGTCCGACC TCGCGCCGCT GTTCGAGGCC TGGGGGCTGC GCCTGCTGCC GGGCAAGGTG
CTCGGCGACG GCGCCTATGC GATGTCCATC AGTCTTGGCC GGGACCAGCG TCCGGCCCGG
CATCCGGCCT GGCTCAGCTT GCCGCGCGAG GCGCTGGACC AGGACGACAT CGCCACTGCC
GGCCTGGAAA GCCTGACCCT GGCGACGCCC GGCATCCTCG AAAGGCTCCC CGGAGCGAGC
ACCAGCTTCA CGCCTTTGCT GCAAAGCTCG GCCCAGGCGA TGCCGTTCGA TGCCTCGCGC
TTCGGCCTGC TGCGCGACCC CGGCGATCTG ATGCGCGAGC TGCGCCCGAG CGGCCGGCGG
CATACTCTCG CCGCCCGTAT CCAGGGGCCG GCGAAGAGTG CCTTCGCGGA GGGCATCGAG
GGGCATCGCG AAGGCCTGAA GGAGGCGCGC AACATCAATG TCATCGTCGT GGCCGATACC
GACCTGCTCA GCGATCGCAT GTGGGTCCAG GTGCAGGACT TCTTCGGCCA GCGCGTGCCG
CAGCCCTGGG CCGACAACGG CGCGCTGGTG GTCAACGCGC TGGACAACCT GTCGGGCACC
GACGCGCTGA TCAGCGTGCG CTCCCGCGGC CGGTTCAGCC GGCCGTTCGT GGTGGTCGAG
CGCCTGCAGC GCGAGGCCGA GACGAGCTTC CGGCAGAAGG AGGAGCAGCT CAAGCAGCGC
CTCGCCGATA CCGAGCAGCA ACTCGCCGCC CTACAGCAGG GTGCCGACCC GGAGAAGGCC
GTCGAACTGA CGCCCGAACA GCAGGCCACG GTGCGCCAGT ACATGCAGGA GAAGCTGCGC
ATCCGCAAGG AGCTGCGCGA GGTGCAGTAC CAGTTGAACG CCGATATCGA CGCACTGGGC
CGCACCCTGA AGCTGGTCAA TATCGCCCTG GTTCCCTCGT TGCTCACGGT CGGCGTGCTG
CTCGGCTGGC TCTGGCGGCG CCGGCGCATG GCCCGGGGAG GGCATTGA
 
Protein sequence
MKRVLSSGAG LLLIALAFLA FNMVSGLLFS GARLDLTEQK LYTISPGTKR ILAGLDEPIN 
LYFFYSDSGA RELVPLRNYA RRVEELLRAY EREANGRIRL QVIDPEPFSE NEDKATEFGL
QGIPLQQGGD NLYFGLAGSN ALDGVQVIPF FPLDQEEFLE YDISRLVQTL AQPQRPVVGL
MSSLPLNGGF DMASRQPTSP WMVMEEIRQQ FDLRSLKSDA TEIPPEVSVL LLVHPKQLPE
QTLYAIDQFV LRGGKLLAFV DPFSEADSGS DFAATLDGDK SSDLAPLFEA WGLRLLPGKV
LGDGAYAMSI SLGRDQRPAR HPAWLSLPRE ALDQDDIATA GLESLTLATP GILERLPGAS
TSFTPLLQSS AQAMPFDASR FGLLRDPGDL MRELRPSGRR HTLAARIQGP AKSAFAEGIE
GHREGLKEAR NINVIVVADT DLLSDRMWVQ VQDFFGQRVP QPWADNGALV VNALDNLSGT
DALISVRSRG RFSRPFVVVE RLQREAETSF RQKEEQLKQR LADTEQQLAA LQQGADPEKA
VELTPEQQAT VRQYMQEKLR IRKELREVQY QLNADIDALG RTLKLVNIAL VPSLLTVGVL
LGWLWRRRRM ARGGH