Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16890 |
Symbol | |
ID | 4383361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1447684 |
End bp | 1449531 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323906 |
Product | putative auxiliary component of ABC transporter |
Protein accession | YP_789494 |
Protein GI | 116051667 |
COG category | [N] Cell motility |
COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG TGTTGTCCTC TGGCGCCGGG CTGTTGCTGA TCGCGCTGGC GTTCCTGGCC TTCAACATGG TCTCCGGCCT GCTGTTCAGC GGCGCGCGGC TCGACCTGAC CGAGCAGAAG CTCTACACCA TCAGCCCCGG CACCAAGCGG ATCCTGGCCG GCCTCGACGA GCCGATCAAC CTGTACTTCT TCTATTCGGA TAGCGGTGCC CGGGAACTGG TGCCGCTGCG CAACTACGCC AGGCGCGTCG AGGAACTGCT GCGCGCCTAC GAGCGCGAGG CGAACGGCAG GATTCGCCTG CAGGTGATCG ATCCCGAGCC GTTCTCCGAG AACGAGGACA AGGCCACCGA GTTCGGCCTG CAAGGAATTC CCCTGCAGCA GGGCGGCGAC AACCTGTACT TCGGCCTGGC CGGCAGCAAC GCCCTGGACG GAGTCCAGGT CATACCCTTC TTCCCGCTCG ATCAGGAGGA GTTCCTCGAA TACGACATCA GCCGCCTGGT GCAGACCCTG GCACAGCCGC AGCGGCCGGT GGTAGGCCTG ATGTCGTCGC TGCCGCTCAA TGGCGGCTTC GACATGGCCA GCCGGCAGCC GACCTCGCCG TGGATGGTCA TGGAGGAAAT CCGCCAGCAA TTCGACCTGC GCAGCCTCAA GAGCGATGCC ACGGAAATCC CGCCGGAGGT CTCGGTGCTG CTGCTGGTGC ATCCCAAGCA GTTACCCGAG CAGACGCTAT ACGCCATCGA CCAGTTCGTC CTGCGCGGGG GCAAGCTGCT GGCGTTCGTC GACCCCTTCA GCGAGGCCGA CAGCGGCAGC GATTTCGCCG CTACGCTGGA TGGCGACAAG TCGTCCGACC TCGCGCCGCT GTTCGAGGCC TGGGGGCTGC GCCTGCTGCC GGGCAAGGTG CTCGGCGACG GCGCCTATGC GATGTCCATC AGTCTTGGCC GGGACCAGCG TCCGGCCCGG CATCCGGCCT GGCTCAGCTT GCCGCGCGAG GCGCTGGACC AGGACGACAT CGCCACTGCC GGCCTGGAAA GCCTGACCCT GGCGACGCCC GGCATCCTCG AAAGGCTCCC CGGAGCGAGC ACCAGCTTCA CGCCTTTGCT GCAAAGCTCG GCCCAGGCGA TGCCGTTCGA TGCCTCGCGC TTCGGCCTGC TGCGCGACCC CGGCGATCTG ATGCGCGAGC TGCGCCCGAG CGGCCGGCGG CATACTCTCG CCGCCCGTAT CCAGGGGCCG GCGAAGAGTG CCTTCGCGGA GGGCATCGAG GGGCATCGCG AAGGCCTGAA GGAGGCGCGC AACATCAATG TCATCGTCGT GGCCGATACC GACCTGCTCA GCGATCGCAT GTGGGTCCAG GTGCAGGACT TCTTCGGCCA GCGCGTGCCG CAGCCCTGGG CCGACAACGG CGCGCTGGTG GTCAACGCGC TGGACAACCT GTCGGGCACC GACGCGCTGA TCAGCGTGCG CTCCCGCGGC CGGTTCAGCC GGCCGTTCGT GGTGGTCGAG CGCCTGCAGC GCGAGGCCGA GACGAGCTTC CGGCAGAAGG AGGAGCAGCT CAAGCAGCGC CTCGCCGATA CCGAGCAGCA ACTCGCCGCC CTACAGCAGG GTGCCGACCC GGAGAAGGCC GTCGAACTGA CGCCCGAACA GCAGGCCACG GTGCGCCAGT ACATGCAGGA GAAGCTGCGC ATCCGCAAGG AGCTGCGCGA GGTGCAGTAC CAGTTGAACG CCGATATCGA CGCACTGGGC CGCACCCTGA AGCTGGTCAA TATCGCCCTG GTTCCCTCGT TGCTCACGGT CGGCGTGCTG CTCGGCTGGC TCTGGCGGCG CCGGCGCATG GCCCGGGGAG GGCATTGA
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Protein sequence | MKRVLSSGAG LLLIALAFLA FNMVSGLLFS GARLDLTEQK LYTISPGTKR ILAGLDEPIN LYFFYSDSGA RELVPLRNYA RRVEELLRAY EREANGRIRL QVIDPEPFSE NEDKATEFGL QGIPLQQGGD NLYFGLAGSN ALDGVQVIPF FPLDQEEFLE YDISRLVQTL AQPQRPVVGL MSSLPLNGGF DMASRQPTSP WMVMEEIRQQ FDLRSLKSDA TEIPPEVSVL LLVHPKQLPE QTLYAIDQFV LRGGKLLAFV DPFSEADSGS DFAATLDGDK SSDLAPLFEA WGLRLLPGKV LGDGAYAMSI SLGRDQRPAR HPAWLSLPRE ALDQDDIATA GLESLTLATP GILERLPGAS TSFTPLLQSS AQAMPFDASR FGLLRDPGDL MRELRPSGRR HTLAARIQGP AKSAFAEGIE GHREGLKEAR NINVIVVADT DLLSDRMWVQ VQDFFGQRVP QPWADNGALV VNALDNLSGT DALISVRSRG RFSRPFVVVE RLQREAETSF RQKEEQLKQR LADTEQQLAA LQQGADPEKA VELTPEQQAT VRQYMQEKLR IRKELREVQY QLNADIDALG RTLKLVNIAL VPSLLTVGVL LGWLWRRRRM ARGGH
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