| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4025 |
|---|
| Symbol | |
|---|
| ID | 7289973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 4057062 |
|---|
| End bp | 4058615 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643586997 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002484700 |
|---|
| Protein GI | 220909389 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00023006 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC TTTCTCCCCG TTTCCGGTTT AATGGGCAAG TGTTGTTCTG GCTTGGTCCC
CTGCTCCTGG TCGCTGGTTT TTCAGCCCGG ATAGTGTCGG GTAACTGGAA TGGTGTTCCT
CTGGGGTTAT TAATCGCGGG GATGGCCATT CTGATCCTGT GGTTAATCTG GCAGGCCAGG
GTTTCTGCAG GGTTCTGGGG TCGGCGTTCC ACCCAGGTGG GTACTAATGC ACTCCTCTCT
ACGCTGGCGG TTCTGGTGAT TCTGGGCCTG CTGAATTTTA TCGCTGTACG CTACCCCCTC
CGCTTAGATC TGACCGAAGC CCAACTGCTG TCTCTAGCCC CTCAATCTCA ACAGGTGTTA
GCAAATCTGA AGCAACCTGT TAAGGTGTTG ATCTTTAATC CCACTCCACC TTCTGAGGCA
CGGCAACTGC TAGAGCAATA CAAACGCCGC AGCCAGTCCA AATTTAGCTT TGAATTCATT
GATCCCCAAG CTGAACCCGG TCTAGTAGAA AAATACAAGG TGCAGAATAT TGGGGATGCT
TTTATTGAGT CCGGCGATCG GGTACAACCG CTGCAAGGCA CCCTCACTGA GGTGAACTTA
ACCCCCGCGA TCGAACAGAT TGGGAGCGAT CGGCGCTCTA AAGCTTACGT TACCCTGGGC
CACGGTGAAC TGGCAGTGGA AGGAGGTCAG GATAGTCTGG CCGCTGCCGT TGCTGCTCTG
CAGCAAAAAA ATATCACTGT AGAATCCCTT AACCTTTTAA CTGCAGGCAA AATTCCCGCC
GATGCCAATG TTGTGATTGT AGCCGGGCCC AAACGCCCTT TCCTGCCAGC CGAAGTCAAA
ATTCTAGAAG ACTATCTCAA AACTGGCGGC AGTGCCCTGT TGTTGCTAGA TCCCCTGGTA
CAGACTGGAC TGGAACCCCT GTTAAAAACC TGGGGGGTGG AAGTGGATAA CCGCCTGGTC
GTGGATGCCT CTGGGGCAGG GCAGCTCGTT GGTTTGGGAC CGGGGGTGGC CCTGGTCAAT
CAGTATGGCG ATCACCCGAT CACCCGCAAT TTTAATCGAG GGTTTTCCTT CTTCCCCCTG
GCCCAGGCGC TGACAGTCCA ACCCAAGGGC GACGAACAGG TCACCGGGCT GCTACAAACC
AGTGAGCAGA GTTGGGCGGA AGCGAATGCA CAGGAGCGGG AGTTAAAGTT AGATCCCCAG
CGCGATCGCA AAGGTCCCCT CACCCTGGGC GTGGCAATCA CTCGTCCCTT AAGCCAGAGC
AAGGATCAAA CTAAAGAGAC TAAAAAAGAA GCCCGACTGG TGGTGATTGG AGATTCTGAC
TTTGCCACCG ACAACGCTTT TGCCCAAAGC TTAAATGGCG ATGTTCTGCT CAATTCCGTT
GCCTGGCTCA GCGATCGCAC CGATCAAACC CTGTCCATTC GTCCGAAGGA ACCCACCAAT
CGGCGTTTAC AGATGACGGA GGCTAAGGGG CGATGGGTGT CCTGGCTGAG TCTGGGGGTA
CTTCCCTTTG GGGCCTTTTT TGCGGCGATC GGGCTGTGGT GGCAACGGCG GTAA
|
|---|
| Protein sequence | MKTLSPRFRF NGQVLFWLGP LLLVAGFSAR IVSGNWNGVP LGLLIAGMAI LILWLIWQAR
VSAGFWGRRS TQVGTNALLS TLAVLVILGL LNFIAVRYPL RLDLTEAQLL SLAPQSQQVL
ANLKQPVKVL IFNPTPPSEA RQLLEQYKRR SQSKFSFEFI DPQAEPGLVE KYKVQNIGDA
FIESGDRVQP LQGTLTEVNL TPAIEQIGSD RRSKAYVTLG HGELAVEGGQ DSLAAAVAAL
QQKNITVESL NLLTAGKIPA DANVVIVAGP KRPFLPAEVK ILEDYLKTGG SALLLLDPLV
QTGLEPLLKT WGVEVDNRLV VDASGAGQLV GLGPGVALVN QYGDHPITRN FNRGFSFFPL
AQALTVQPKG DEQVTGLLQT SEQSWAEANA QERELKLDPQ RDRKGPLTLG VAITRPLSQS
KDQTKETKKE ARLVVIGDSD FATDNAFAQS LNGDVLLNSV AWLSDRTDQT LSIRPKEPTN
RRLQMTEAKG RWVSWLSLGV LPFGAFFAAI GLWWQRR
|
|---|
| |