More than 300 homologs were found in PanDaTox collection
for query gene Gbro_3956 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_3956  acyl-CoA dehydrogenase domain protein  100 
 
 
378 aa  741    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13539  acyl-CoA dehydrogenase fadE27  45.14 
 
 
373 aa  265  8e-70  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000000000581806  hitchhiker  0.00000153884 
 
 
-
 
NC_008146  Mmcs_4623  acyl-CoA dehydrogenase-like protein  43.5 
 
 
365 aa  261  1e-68  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4711  acyl-CoA dehydrogenase domain-containing protein  43.5 
 
 
365 aa  261  1e-68  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2610  acyl-CoA dehydrogenase domain-containing protein  44.85 
 
 
374 aa  253  4.0000000000000004e-66  Salinispora tropica CNB-440  Bacteria  normal  0.899793  normal 
 
 
-
 
NC_009953  Sare_2809  acyl-CoA dehydrogenase domain-containing protein  43.35 
 
 
367 aa  247  3e-64  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000259452 
 
 
-
 
NC_009338  Mflv_1550  acyl-CoA dehydrogenase domain-containing protein  45.03 
 
 
369 aa  246  4.9999999999999997e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0825482  normal  0.540557 
 
 
-
 
NC_009077  Mjls_5006  acyl-CoA dehydrogenase domain-containing protein  44.03 
 
 
365 aa  244  9.999999999999999e-64  Mycobacterium sp. JLS  Bacteria  normal  0.25731  normal  0.608008 
 
 
-
 
NC_008726  Mvan_5207  acyl-CoA dehydrogenase domain-containing protein  43.46 
 
 
369 aa  234  1.0000000000000001e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.475033  normal  0.329815 
 
 
-
 
NC_014158  Tpau_3807  acyl-CoA dehydrogenase domain protein  41.18 
 
 
360 aa  221  1.9999999999999999e-56  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2516  acyl-CoA dehydrogenase domain-containing protein  45.41 
 
 
370 aa  220  3e-56  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3319  acyl-CoA dehydrogenase domain-containing protein  38.95 
 
 
375 aa  204  1e-51  Sphingomonas wittichii RW1  Bacteria  normal  0.501175  hitchhiker  0.000226088 
 
 
-
 
NC_013510  Tcur_3481  acyl-CoA dehydrogenase domain protein  40.43 
 
 
364 aa  201  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2175  acyl-CoA dehydrogenase domain protein  35.32 
 
 
375 aa  176  7e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.548032  normal 
 
 
-
 
NC_013510  Tcur_3644  acyl-CoA dehydrogenase domain protein  33.95 
 
 
368 aa  158  2e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.521752  n/a   
 
 
-
 
NC_013595  Sros_8198  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
361 aa  155  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.905696  normal 
 
 
-
 
NC_013441  Gbro_0883  acyl-CoA dehydrogenase domain protein  34.96 
 
 
371 aa  137  4e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5364  acyl-CoA dehydrogenase domain-containing protein  34.9 
 
 
385 aa  135  1.9999999999999998e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5275  acyl-CoA dehydrogenase-like protein  34.9 
 
 
385 aa  135  1.9999999999999998e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5654  acyl-CoA dehydrogenase domain-containing protein  34.31 
 
 
385 aa  132  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  0.693772  normal 
 
 
-
 
NC_013159  Svir_16740  acyl-CoA dehydrogenase  31.62 
 
 
389 aa  128  1.0000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7118  putative acyl-CoA dehydrogenase  31.11 
 
 
375 aa  129  1.0000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.695854 
 
 
-
 
NC_007974  Rmet_5142  putative acyl-CoA dehydrogenase  34.31 
 
 
392 aa  127  4.0000000000000003e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.609608  normal  0.24821 
 
 
-
 
NC_007778  RPB_1687  Acyl-CoA dehydrogenase-like  31.3 
 
 
375 aa  124  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.473002  normal  0.801014 
 
 
-
 
NC_009338  Mflv_1509  acyl-CoA dehydrogenase domain-containing protein  34.81 
 
 
333 aa  124  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.942292  normal 
 
 
-
 
NC_007925  RPC_2197  acyl-CoA dehydrogenase-like  33.06 
 
 
375 aa  124  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0689  acyl-CoA dehydrogenase domain protein  30.81 
 
 
370 aa  125  2e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3855  acyl-CoA dehydrogenase domain protein  34.04 
 
 
751 aa  124  2e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2335  acyl-CoA dehydrogenase domain-containing protein  31.68 
 
 
363 aa  123  4e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.607114 
 
 
-
 
NC_009719  Plav_1031  acyl-CoA dehydrogenase domain-containing protein  30.81 
 
 
371 aa  122  9.999999999999999e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.818052  normal 
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  30.21 
 
 
377 aa  120  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4312  acyl-CoA dehydrogenase domain-containing protein  31.65 
 
 
364 aa  120  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.450465 
 
 
-
 
NC_008146  Mmcs_5119  acyl-CoA dehydrogenase-like protein  31.32 
 
 
368 aa  120  3e-26  Mycobacterium sp. MCS  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_008705  Mkms_5208  acyl-CoA dehydrogenase domain-containing protein  31.32 
 
 
368 aa  120  3e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5499  acyl-CoA dehydrogenase domain-containing protein  31.32 
 
 
368 aa  120  3e-26  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1908  acyl-CoA dehydrogenase domain protein  31.3 
 
 
375 aa  120  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.195445  n/a   
 
 
-
 
NC_009338  Mflv_0345  acyl-CoA dehydrogenase domain-containing protein  31.77 
 
 
389 aa  119  7.999999999999999e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7780  putative acyl-CoA dehydrogenase  31.77 
 
 
377 aa  119  9e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4676  acyl-CoA dehydrogenase-like protein  33.76 
 
 
336 aa  119  9e-26  Mycobacterium sp. MCS  Bacteria  normal  0.721849  n/a   
 
 
-
 
NC_008705  Mkms_4762  acyl-CoA dehydrogenase domain-containing protein  33.76 
 
 
336 aa  119  9e-26  Mycobacterium sp. KMS  Bacteria  normal  0.224831  normal 
 
 
-
 
NC_009077  Mjls_5061  acyl-CoA dehydrogenase domain-containing protein  33.76 
 
 
336 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  0.407734  normal  0.846778 
 
 
-
 
NC_008699  Noca_2790  acyl-CoA dehydrogenase domain-containing protein  33.45 
 
 
743 aa  118  9.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5360  acyl-CoA dehydrogenase domain protein  31.35 
 
 
373 aa  117  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1851  acyl-CoA dehydrogenase domain-containing protein  29.35 
 
 
358 aa  117  3e-25  Sphingomonas wittichii RW1  Bacteria  normal  0.970019  normal 
 
 
-
 
NC_009338  Mflv_2286  acyl-CoA dehydrogenase domain-containing protein  29.58 
 
 
368 aa  116  6e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.937022 
 
 
-
 
NC_008705  Mkms_5278  acyl-CoA dehydrogenase domain-containing protein  32.04 
 
 
385 aa  116  6e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5189  acyl-CoA dehydrogenase-like protein  32.04 
 
 
385 aa  116  6e-25  Mycobacterium sp. MCS  Bacteria  normal  0.454654  n/a   
 
 
-
 
NC_008726  Mvan_4007  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
365 aa  115  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5570  acyl-CoA dehydrogenase domain-containing protein  31.77 
 
 
385 aa  114  3e-24  Mycobacterium sp. JLS  Bacteria  normal  0.0891076  normal 
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  34.33 
 
 
383 aa  113  5e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3727  acyl-CoA dehydrogenase domain-containing protein  29.97 
 
 
378 aa  113  5e-24  Nocardioides sp. JS614  Bacteria  normal  0.0588386  n/a   
 
 
-
 
NC_007958  RPD_3606  acyl-CoA dehydrogenase-like  30.75 
 
 
375 aa  113  6e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.343356  normal 
 
 
-
 
NC_008726  Mvan_4380  acyl-CoA dehydrogenase domain-containing protein  29.55 
 
 
371 aa  112  7.000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2697  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
384 aa  112  8.000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.963882 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  30.65 
 
 
379 aa  112  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  30.39 
 
 
379 aa  111  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  29.34 
 
 
381 aa  111  3e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0061  acyl-CoA dehydrogenase domain protein  31.69 
 
 
359 aa  110  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  28.9 
 
 
394 aa  110  3e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_009565  TBFG_11962  acyl-CoA dehydrogenase fadE18  32.92 
 
 
363 aa  110  4.0000000000000004e-23  Mycobacterium tuberculosis F11  Bacteria  normal  0.618058  normal  0.535978 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  29.23 
 
 
381 aa  109  6e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  29.23 
 
 
381 aa  109  6e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  29.23 
 
 
381 aa  109  8.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  30.91 
 
 
379 aa  109  8.000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  26.9 
 
 
386 aa  109  8.000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  28.97 
 
 
381 aa  108  1e-22  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  28.97 
 
 
381 aa  108  1e-22  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_013757  Gobs_2178  acyl-CoA dehydrogenase domain protein  30.52 
 
 
383 aa  109  1e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_007509  Bcep18194_C7145  Acyl-CoA dehydrogenase  32.23 
 
 
371 aa  108  1e-22  Burkholderia sp. 383  Bacteria  normal  0.237527  normal 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  28.97 
 
 
381 aa  108  1e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  28.97 
 
 
381 aa  108  1e-22  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  28.97 
 
 
381 aa  108  1e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  28.97 
 
 
381 aa  108  1e-22  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  30.91 
 
 
379 aa  108  2e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5276  acyl-CoA dehydrogenase-like  30.34 
 
 
388 aa  108  2e-22  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2850  acyl-CoA dehydrogenase domain-containing protein  30.51 
 
 
381 aa  108  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  30.67 
 
 
379 aa  107  3e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  28.21 
 
 
381 aa  107  4e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  29.37 
 
 
381 aa  107  4e-22  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008726  Mvan_5257  acyl-CoA dehydrogenase domain-containing protein  32.12 
 
 
333 aa  107  5e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.367408 
 
 
-
 
NC_007948  Bpro_4190  isovaleryl-CoA dehydrogenase  28.9 
 
 
393 aa  107  5e-22  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2139  acyl-CoA dehydrogenase domain-containing protein  28.04 
 
 
376 aa  106  6e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.548547  n/a   
 
 
-
 
NC_009565  TBFG_13577  acyl-CoA dehydrogenase fadE28  30.7 
 
 
345 aa  106  7e-22  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.0019231 
 
 
-
 
NC_009077  Mjls_4022  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
716 aa  106  7e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.98053 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  30.65 
 
 
379 aa  106  8e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1948  isovaleryl-CoA dehydrogenase  30.33 
 
 
387 aa  105  1e-21  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.113187  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  30.41 
 
 
379 aa  105  1e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_013131  Caci_1154  acyl-CoA dehydrogenase domain protein  30.92 
 
 
373 aa  105  1e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  30.41 
 
 
379 aa  105  2e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  28.14 
 
 
382 aa  104  2e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1333  acyl-CoA dehydrogenase domain-containing protein  28.32 
 
 
396 aa  105  2e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0832215  hitchhiker  0.00420458 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  30.41 
 
 
379 aa  105  2e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3427  acyl-CoA dehydrogenase domain-containing protein  31.53 
 
 
371 aa  104  2e-21  Caulobacter sp. K31  Bacteria  normal  0.143009  normal  0.517094 
 
 
-
 
NC_012029  Hlac_1318  acyl-CoA dehydrogenase domain protein  29.18 
 
 
384 aa  103  4e-21  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.0793911 
 
 
-
 
NC_007778  RPB_1750  Acyl-CoA dehydrogenase-like  29.92 
 
 
380 aa  103  4e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_007794  Saro_1645  isovaleryl-CoA dehydrogenase  29.26 
 
 
387 aa  103  4e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3842  acyl-CoA dehydrogenase-like  28.39 
 
 
392 aa  103  4e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.990363  n/a   
 
 
-
 
NC_007204  Psyc_0313  isovaleryl-CoA dehydrogenase  26.6 
 
 
395 aa  103  5e-21  Psychrobacter arcticus 273-4  Bacteria  normal  0.740089  normal 
 
 
-
 
NC_009380  Strop_2619  acyl-CoA dehydrogenase domain-containing protein  32.43 
 
 
366 aa  103  5e-21  Salinispora tropica CNB-440  Bacteria  normal  0.0175274  normal  0.715708 
 
 
-
 
NC_008048  Sala_1529  acyl-CoA dehydrogenase-like protein  28.5 
 
 
389 aa  103  5e-21  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.845789  normal  0.622728 
 
 
-
 
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