| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3956 |
|---|
| Symbol | |
|---|
| ID | 8553337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4251281 |
|---|
| End bp | 4252417 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003275023 |
|---|
| Protein GI | 262203815 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA CTCTCCCCGA AACCGCCTCC GACGTCCGGG GTCTCGCCCG CGACATCGCC
ACCAAGATCA GCACCGACGA CCGCATCGCC GAACTCGAAC ACAACGATGC CCCGCTCGAC
ACCGACCTGT GGCGTGAGCT CGGCGCCGCC GGTCTGCTGG GCCTGGAACT CTCGTCGGCT
GTCGCCGGTG ATTCCGGCGG TGATCTCACG GCCATCGAGA ACTGCGGCGT CGCCGAGGAA
CTCGGCCGGC ACCTGGCGCG TGTCCCGTTC GGTCCGCACG CGCTGGCCGC GCTGCCGGTA
CTCGCCGAGC GCGGCAGAGA CGAACTGCGC GAGCGCCTCC TCGGCGCCGC GGCGGCCGGC
ACCATCGTGC TCACCGTTGC CTTCGAGGAG GATCTCGGCG CCGGTGCGAC CGAGCCCGGT
GCGACGCTGA GCGCCGACGA CGTCCCCGTT CTGCGCGGCG CAAAGGTCAA CGTGCCCTAT
GGAATTGCCG CCGACGTGTT CCTCGTCAAC GCGACCGGAC CGTCCGGCAC CGTGGCGGTC
GCGGTCTTCG CCGACGACCC GGGTGTCCGC GTCACCCCGA CCACCTCCAC CGGGCTGGTG
CCCACCGCCG AGGTCGACTT CACCGATGTC CCTGTGAGCG CCGATCGGAT CTTGAGTGGC
GGCGCGGACA CGGTGGCTGA CATCTCCGAC CGGCTCACCC TCGCGGTGTG CGCCGAACAG
TCCGGAATCG TCTCCCGCGC ACTAGAACTC ACTGCCGAGT ACGCGCGGGA ACGCGAACAG
TTCGGCCGGG CCATCGGCTC GTTCCAGGCG GTCGCCCAGC GCCTCGCCGA CGGGTACATC
GATGCACAGG CACTGTCGCT GACCACCACG CAGGCGGCCT GGCTGCTGGC CAACGCCGGC
GCGGACACCG CCGATTCCGA GCTGCACACC GCCATCGCCA CGGCCAAGTT CTGGGCGGCC
GAGGCCGGAC ATCGTGTCGC CCACACCACG GTTCACGTGC ATGGTGGCGT CGGGCTGGAC
ACCAGCCATC CGGTCCACCG GTACTTCCTG CGCGCCAAGC AGAACGAGTT CACCGCGGGC
AATGTGCCGG CGACCCTACG GACCATCGGG GCGGCGCTGG CCGCGACGCC CGCCTGA
|
|---|
| Protein sequence | MDFTLPETAS DVRGLARDIA TKISTDDRIA ELEHNDAPLD TDLWRELGAA GLLGLELSSA
VAGDSGGDLT AIENCGVAEE LGRHLARVPF GPHALAALPV LAERGRDELR ERLLGAAAAG
TIVLTVAFEE DLGAGATEPG ATLSADDVPV LRGAKVNVPY GIAADVFLVN ATGPSGTVAV
AVFADDPGVR VTPTTSTGLV PTAEVDFTDV PVSADRILSG GADTVADISD RLTLAVCAEQ
SGIVSRALEL TAEYAREREQ FGRAIGSFQA VAQRLADGYI DAQALSLTTT QAAWLLANAG
ADTADSELHT AIATAKFWAA EAGHRVAHTT VHVHGGVGLD TSHPVHRYFL RAKQNEFTAG
NVPATLRTIG AALAATPA
|
|---|
| |