Gene TBFG_11962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11962 
Symbol 
ID5222639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2192121 
End bp2193212 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID640606719 
Productacyl-CoA dehydrogenase fadE18 
Protein accessionYP_001287899 
Protein GI148823145 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones330 
Plasmid unclonability p-value0.618058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones201 
Fosmid unclonability p-value0.535978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTCC GATACAGCAC CGAACAAGAC GATTTCCGCG CCTCGCTGCG CGGCTTCCTT 
GGCCGGGGCG CGCCCGTGCG GGAGATGGCT GCCGCGGACG GATCCGACCG CAGGCTGTGG
CAACGGCTTT GCACCGAGCT CGAATTACCC GCGCTGCACG TCCCGCCGGA GCACGGCGGA
TTGGGTGCCA CCTTAGTCGA GACCGCGATC GCGTTTGCCG AACTCGGCCG GGCGCTCACC
CCAATTCCCT TTGCGGCCAC GGTGTTTGCG ATCGAAGCGA TTCTGCGCAT GGGCGACGAC
GAGCAGCGCA AGCGCCTGCT CGCCGGTCTG CTTACCGGCG CGCGGATCGG AACGATCGCC
GTCAGTGGCC ACGACGTCGC GTCGGCTACC ACCGTTCGGG CCGTTCGGCG CGACGGTCGG
CCCGCACTCA CCGGCGAGTG CACCCCGGTG CTGCACGGTC ACGTCGCAGA CCTGTTCGTG
GTGCCCGCGG TGGCCGACGG GTCGATCGTT CTGCACGTCG TGGCCGCCGA CGCCCCCGGG
GTGACCGTCA CACCGTTGCC CTCGTTTGAC ATCACCCGTC CGGTCGTCAC GCTCCGGCTG
GCGGGGTCCC CCGCCGAGCC GCTGACCGCC GGGACGCCCG ACGATATGGA GCGGGTGCTC
GACGTGGCCC GGGTGCTGTT GGCCGCCGAG ATGCTGGGCG GCGCCGAGGC CTGCCTCGAC
CTGGCGGTGC AATACGCCGG GCGGCGAACG CAATTCGATC GACCGATCGG TTCCTTCCAG
GCGGTCAAGC ACGCCTGCGC CGACATGATG ATCGAGATCG ACGCCACCCG GGCGACGGTG
ATGTTCGCCG CGATGAGCGC GGCCAACGGT GACGAACTCC AGACGGTCGC GCCGCTGGCG
AAGGCGCAGA CCGCGGAAAC CTTTGTGTTA TGCGCCGGCT CCGCTCTTCA GATCCACGGT
GCCATCGCCT TCACGTGGGA GCACGACCTG CACCTGTATT ACCGCCGGGC CAAGACCACC
GAGGCGCTTT TCGGGAGCAG CGCTCGAAAT CGTGCGCTGC TCGCCGAACG CGCGGGGCTT
GTGAAAGCCT AG
 
Protein sequence
MDFRYSTEQD DFRASLRGFL GRGAPVREMA AADGSDRRLW QRLCTELELP ALHVPPEHGG 
LGATLVETAI AFAELGRALT PIPFAATVFA IEAILRMGDD EQRKRLLAGL LTGARIGTIA
VSGHDVASAT TVRAVRRDGR PALTGECTPV LHGHVADLFV VPAVADGSIV LHVVAADAPG
VTVTPLPSFD ITRPVVTLRL AGSPAEPLTA GTPDDMERVL DVARVLLAAE MLGGAEACLD
LAVQYAGRRT QFDRPIGSFQ AVKHACADMM IEIDATRATV MFAAMSAANG DELQTVAPLA
KAQTAETFVL CAGSALQIHG AIAFTWEHDL HLYYRRAKTT EALFGSSARN RALLAERAGL
VKA