| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4676 |
|---|
| Symbol | |
|---|
| ID | 4113505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4956979 |
|---|
| End bp | 4957989 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638033827 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_641836 |
|---|
| Protein GI | 108801639 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.721849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTCA GTCCAGACGA GGGGCAGCAG GCTGTCGCCG ATGTGGTGAC GGCGGTGCTC
GAGCGTGACA ACACTTGGGA CGCCCTGGTT TCCGGCGGCG TCACCGCGCT CGGGGTGCCG
GAACGCCTCG GCGGGGACGG CGTCGGCTTG GCCGAGCTCG CCACCGCGCT GACCGAGATC
GGCAGGCGCG GTACCATCAG CCCGGCGCTC GCCACGGTCG GACTCGGGCT CGTCCCGCTG
CTCGACCTGG CTTCCGACGA ACAGCAGGAC CGCTACCTCG CAGGCGTGGC CAAGGGCGCG
ATCCTGACCG CCGCGCTCAA CGAGCCGGGT GTGGCGCTGC CGGATCGGCC GGCGACCACG
CTGGTCGGCG ACCGCCTCAA CGGCACCAAG GTCGGAGTTC CGTATGCCGG TAGGGCTGAA
TACATCCTGG TGAGCACCGA CAACGGTGTC GTGGTGGTGT CGGCGTCCGC CGACGGCGTG
CAGGTCACCG AGACGCCGAC CTCCAACGGC GGGGACGAGG CTGCGGTCAC GTTCTCCGAC
GTCGCGGTCG ACGACGCCGA TGTGCTGGGG TCCGGTTCGG AGGCGGTCCG TCGTGTCAAT
GCGCTGGCGC TGGCCGCCAC TGGGGCGTTC GCCGCCGGGC TGGTGGCGGG TGCCCTGCGG
CTGACCGCGG ACTACGTCGC CAACCGGCAT CAGTTCGGGC GTCCGCTGTC GACGTTCCAG
ACCGTCGCCG CGCAGCTTGC CGAGGTGTAC ATCGCCTCTC GCACATTGGA TCTCGCTGCG
AATTCGGTGG TCTGGCGGCT AGCTGAAGGG CTTGACGCCG CTGACGACCT CGAGGTGCTC
GGGTACTGGC TGACCTCGCA GGCGCCGCCG GTCATGCAGA CCTGCCATCA CCTGCACGGC
GGTATGGGTA TGGACATCAC CTACCCGATG GACCGCTACT ACTCGACGAT CAAGGACCTG
TCCCGGTTAC TGGGTGGCCC GTCGCATCGT CTGGACCTGG TGGGAGTTTG A
|
|---|
| Protein sequence | MDFSPDEGQQ AVADVVTAVL ERDNTWDALV SGGVTALGVP ERLGGDGVGL AELATALTEI
GRRGTISPAL ATVGLGLVPL LDLASDEQQD RYLAGVAKGA ILTAALNEPG VALPDRPATT
LVGDRLNGTK VGVPYAGRAE YILVSTDNGV VVVSASADGV QVTETPTSNG GDEAAVTFSD
VAVDDADVLG SGSEAVRRVN ALALAATGAF AAGLVAGALR LTADYVANRH QFGRPLSTFQ
TVAAQLAEVY IASRTLDLAA NSVVWRLAEG LDAADDLEVL GYWLTSQAPP VMQTCHHLHG
GMGMDITYPM DRYYSTIKDL SRLLGGPSHR LDLVGV
|
|---|
| |