| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1750 |
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| Symbol | |
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| ID | 3909737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2000372 |
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| End bp | 2001514 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883644 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_485369 |
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| Protein GI | 86748873 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03203] pimeloyl-CoA dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0168825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG ATTTGTCGGA AGAGCAGCGG CTGCTCAAGG AAAGCGTCGA GGGTCTGTTG
AAATCCTCGT ACGATTTCGA CAGCCGCAAG AAATACGCCA AGGAAAAAGA CGGCTGGAGC
CGCGACGTCT GGGGCAAGTT TGCCGAGCAG GGCCTGCTCG GCCTGCCGTT CTCGGAAGAA
GACGGCGGCT TCGGCGCCGG CGCGGTCGAG ACCATGATCG TGATGGAAGC GCTCGGCCAT
TCGCTGGTGC TCGAGCCGTA TCTGCCGACC GTGATCATCG CCGGCGGCTT CCTGCGCCGC
GCCGGCTCGG CCGCGCAGAA GGCCGCGCAT CTGCCGGGCA TCATCGACGG CAGCAAGACC
TTCGCGTTCG CCCAGCTCGA GAAGAATTCG CGCTGGGATC TCGGCGACGT CTCCACCACT
GCCAAGAAGA AGGGCGACGG CTGGATCCTC GACGGCGAGA AGTTCGTGGT GCTGAACGGC
GAGGCCGCCG ACACGCTGGT GGTCACCGCG CGCACCGCGG GCGGCCAGCG TGACCGCAAC
GGCGTCGGCG TGTTTCTGGT GCCGGCCGAC GCCAAGGGCG TGTCGCGCAA GGGCTACCCG
ACCCAGGACG GCCAGCGCGC CGCCGACATC ACCTTCACCG GCGTCGAGAT CGGCGCGGAT
GCAGTGATCG GCGATCCGGC CAACGGCCTG CCGCTGATCG AGCAGGTGGT CGACGACGCC
CGCTCGGCGC TGTGCGCGGA GGCGGTCGGC GCGATGGATG AATCGCTCAC CACCACGGTC
GAGTACATCA AGACCCGCAA GCAGTTCGGC GTGCCGATCG GCAGCTTCCA GGTGCTGCAG
CATCGCGCCG CCGACATGTT CGTCGCCGCC GAACAGGCCC GCTCGATGGC GATGTTCGCC
ACCATGGCGG CGGATTTCGA CGACGCGAAA GAGCGTGCCA ACGCCATCGC GGCGGCCAAG
GTGCAGATCG GCAAGTCGGC CAAGTTCGTC GGCCAGCAGT CGATCCAGCT GCACGGCGGC
ATCGGCATGA CGATGGAAGC CAAGATCGGC CACTACTTCA AGCGGCTGAC CATGATCGAA
CAGACCTTCG GCGACACCGA CCACCACTTG GCGCGCGTCA GCGAAGCCGG CGGGCTGATC
TGA
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| Protein sequence | MDFDLSEEQR LLKESVEGLL KSSYDFDSRK KYAKEKDGWS RDVWGKFAEQ GLLGLPFSEE
DGGFGAGAVE TMIVMEALGH SLVLEPYLPT VIIAGGFLRR AGSAAQKAAH LPGIIDGSKT
FAFAQLEKNS RWDLGDVSTT AKKKGDGWIL DGEKFVVLNG EAADTLVVTA RTAGGQRDRN
GVGVFLVPAD AKGVSRKGYP TQDGQRAADI TFTGVEIGAD AVIGDPANGL PLIEQVVDDA
RSALCAEAVG AMDESLTTTV EYIKTRKQFG VPIGSFQVLQ HRAADMFVAA EQARSMAMFA
TMAADFDDAK ERANAIAAAK VQIGKSAKFV GQQSIQLHGG IGMTMEAKIG HYFKRLTMIE
QTFGDTDHHL ARVSEAGGLI
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