| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1908 |
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| Symbol | |
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| ID | 6409568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2056943 |
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| End bp | 2058070 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711794 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990906 |
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| Protein GI | 192290301 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.195445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCG ATTTCTCCGA CGACCAGAAG CAACTGCGCG ATCAGGCGCG GCGGTTTCTT
GCTGAGAAGT GCCCGCCGAA GGCGGTGCGT GCCGTGCTCG AAGGCAAGGC GGATTACGAC
CGCGACCTGT GGAAGGGCCT TGCCGAGATG GGCTTCCTCG GCGTTGCGAT TCCCGAGGAA
TACGGCGGGA CCGGTGCGGG CCACCTCGAG CTCTGCGTGA TCGCCGAGGA ACTCGGCCGC
GTGCTGGCGC CGGTGCCGTT CTCGTCGACC GTGTATCTGG CCGCCGAAGC GCTGCTGCTG
GCGGGTTCGG AAGAGCAGAA GCAGAAGTGG CTGCCGAAGA TCTCGTCGGG TGAGGCAATC
GGCACGCTGG CGCTGTTCGA AGGCACCGGC AATCCGTCGC CGGCCGCCGT TAAACTCGCG
GTCTCGAACG GCACGCTCAC TGGCACCAAG AAGCCGGTCG CCGACGGCGC AATCGCCGAT
TTCGCGATCG TCGCGGCGCG CAGCGGCAAC AGCGGCCGCG AGACTGACGT CTCGCTGTTC
CTGGTCGACC TGAAGGCCGG TGGCGTCACC GCCAAGCCGC TGCAGAACGT CGATCCGTCG
CGCCAGCAGG CCGAACTGAC CTTCGCGGGC GCCAAGGCCG AGCCGCTCGG CGCGGCCAAT
GAGGGCTGGA GCATTCTGTC GCGCGTGATG GACCGCGCCG CAGTGCTGAT CGCGTTCGAG
CAGGTCGGCG GCGCCGACCG CGCGCTGGAA ATGGGCCGCG ACTATGCGCT CGACCGCATC
GCGTTCGGCC GGCAGATCGG CTCGTTCCAG GCGATCAAGC ACATCCTCGC CGACATGTAC
GTCTCGGCGA CGCTGGCGCG CTCGAACTCC TACTACGGCG CCTGGGCGCT CTCGACCGAT
GCGGCCGAGC TGCCGGAGGC CGCCGCTGCG GCGCGGATCA GTGCGACGCA GGCTTTCCAG
CATTGCGCCA AGCAGAACAT CCAGGTGCAC GGCGGCATGG GCTTCACCTG GGAGTTCGAC
TGCCACCTGT ACTATCGCCG CTCCAACGCG CTGGCGCTCA GCCTCGGCAG CCAGTCGTAT
TGGGAAGATC AGCTGATCGA CCGGATGCGC CAGAAGAACG CGGCGTAA
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| Protein sequence | MNFDFSDDQK QLRDQARRFL AEKCPPKAVR AVLEGKADYD RDLWKGLAEM GFLGVAIPEE
YGGTGAGHLE LCVIAEELGR VLAPVPFSST VYLAAEALLL AGSEEQKQKW LPKISSGEAI
GTLALFEGTG NPSPAAVKLA VSNGTLTGTK KPVADGAIAD FAIVAARSGN SGRETDVSLF
LVDLKAGGVT AKPLQNVDPS RQQAELTFAG AKAEPLGAAN EGWSILSRVM DRAAVLIAFE
QVGGADRALE MGRDYALDRI AFGRQIGSFQ AIKHILADMY VSATLARSNS YYGAWALSTD
AAELPEAAAA ARISATQAFQ HCAKQNIQVH GGMGFTWEFD CHLYYRRSNA LALSLGSQSY
WEDQLIDRMR QKNAA
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