Gene Spea_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2139 
Symbol 
ID5662532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2590911 
End bp2592041 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content45% 
IMG OID641236742 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001501994 
Protein GI157961960 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.548547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT CATTAACCGA AGAGCAGCAA GCGATCTTTG AAATGTCTCA GGGAGTGTTT 
AACGATTGCT GCACCGATGA GTACCTACGT GAAGTTGACG ATTCAAATAT CACCATAATG 
GATACATTGT GGCAAACCTG TATTGAAACC GGATTACATG CGCTGTATTT GCCAGAAGAG 
TATGGCGGAA GTGAATTAGG AATGACCGAA CTTGCATTAG TACTACAAGC ACAAGGTGCA 
GCATTAGGTT TGGTTCCACT TTGGCGCCAT CAATTAGCCG GGGCATGTTT AGCCAAGTTT 
GCTACTGCAG ATCTACACCC CGTTGTGCGC GCAGCAGCTT CTGCTGACAA TATATTAACC 
CTCAGTATGC CAAAGCTTAG CAAGCATAGC GCGTTAGTTA AGGCGACTCC GAATAAAGAA 
AACAACGGTT ACTTACTTAG CGGTAAATTA TCAGCTGTTG CAGACGCAGC TATCGCTAGC 
CATGTGTTGA TGCCAATTGA AATCGCTAAC AAAGTGGGTT TTGCGCTGGT GCAATTAGAT 
GCTGTCAATA TAGAGCGTAT CGATGGAGTA CTAACTCAGG GCGAACAAGT TTCAGATCTT 
GTTTTTAATC AATGCCCAGT ATTCGGGCAT CAGCTTCTAG CAGATGGTGC CAGTGAATGG 
CTTACTCCCA GAGTGCTTGC AGCCTTTAGT GCAATGCAGC TTGGAGTCAG CGAGGAACAG 
CTTAAAAGAA CCGTTGAATA TATCTGTGAG CGTCGTCAAT TTGATCGTCA AATTGGCGCA 
TTCCAAGCCG TTCAAATGAC AATGGCTGAT TGTCGTATTG CCTTAGAAGT GCTGCGTTCC 
ACCTTATTGC AACTTTGCTA TCGCATTGAT GCGGGCCTTG GTTGTGATTC TGAAGCGCTA 
GCTTGTGCGC TGCATGCTTG TGATGCAGGA CACTTGATAG GCCATAAAGC GCAACATGTT 
CATGGCGGTT TCGGTGTAGA TATCAGTTAT CCAATACATC GTTATTTGTA TTGGAGCCGC 
GCAATATCAC TAGGACTTGG CGGAAGCCAA GCAATAACCG AGCGGTTAGG TGACTGGTTA 
GCAGAGAATG ACAAACTTGG ATGGAAGTAT GACCTCAATG AAAACAATTA A
 
Protein sequence
MDFSLTEEQQ AIFEMSQGVF NDCCTDEYLR EVDDSNITIM DTLWQTCIET GLHALYLPEE 
YGGSELGMTE LALVLQAQGA ALGLVPLWRH QLAGACLAKF ATADLHPVVR AAASADNILT 
LSMPKLSKHS ALVKATPNKE NNGYLLSGKL SAVADAAIAS HVLMPIEIAN KVGFALVQLD 
AVNIERIDGV LTQGEQVSDL VFNQCPVFGH QLLADGASEW LTPRVLAAFS AMQLGVSEEQ 
LKRTVEYICE RRQFDRQIGA FQAVQMTMAD CRIALEVLRS TLLQLCYRID AGLGCDSEAL 
ACALHACDAG HLIGHKAQHV HGGFGVDISY PIHRYLYWSR AISLGLGGSQ AITERLGDWL 
AENDKLGWKY DLNENN