More than 300 homologs were found in PanDaTox collection
for query gene RPB_1687 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1908  acyl-CoA dehydrogenase domain protein  95.73 
 
 
375 aa  703    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.195445  n/a   
 
 
-
 
NC_007778  RPB_1687  Acyl-CoA dehydrogenase-like  100 
 
 
375 aa  766    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.473002  normal  0.801014 
 
 
-
 
NC_009485  BBta_7118  putative acyl-CoA dehydrogenase  83.47 
 
 
375 aa  657    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.695854 
 
 
-
 
NC_007958  RPD_3606  acyl-CoA dehydrogenase-like  93.07 
 
 
375 aa  699    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.343356  normal 
 
 
-
 
NC_007925  RPC_2197  acyl-CoA dehydrogenase-like  80.8 
 
 
375 aa  621  1e-177  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0964  acyl-CoA dehydrogenase domain-containing protein  57.98 
 
 
375 aa  430  1e-119  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.367586  normal 
 
 
-
 
NC_009511  Swit_1603  acyl-CoA dehydrogenase domain-containing protein  57.87 
 
 
372 aa  414  1e-114  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3427  acyl-CoA dehydrogenase domain-containing protein  56.91 
 
 
371 aa  410  1e-113  Caulobacter sp. K31  Bacteria  normal  0.143009  normal  0.517094 
 
 
-
 
NC_009719  Plav_1031  acyl-CoA dehydrogenase domain-containing protein  51.06 
 
 
371 aa  400  9.999999999999999e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.818052  normal 
 
 
-
 
NC_009511  Swit_3398  acyl-CoA dehydrogenase domain-containing protein  46.38 
 
 
366 aa  328  8e-89  Sphingomonas wittichii RW1  Bacteria  normal  0.157056  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1633  acyl-CoA dehydrogenase-like protein  47.27 
 
 
363 aa  281  1e-74  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0193682  normal  0.810122 
 
 
-
 
NC_009921  Franean1_5573  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
392 aa  234  1.0000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  0.33081  normal 
 
 
-
 
NC_009077  Mjls_5654  acyl-CoA dehydrogenase domain-containing protein  39.71 
 
 
385 aa  232  8.000000000000001e-60  Mycobacterium sp. JLS  Bacteria  normal  0.693772  normal 
 
 
-
 
NC_008726  Mvan_4312  acyl-CoA dehydrogenase domain-containing protein  38.29 
 
 
364 aa  232  9e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.450465 
 
 
-
 
NC_008705  Mkms_5364  acyl-CoA dehydrogenase domain-containing protein  39.43 
 
 
385 aa  231  1e-59  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5275  acyl-CoA dehydrogenase-like protein  39.43 
 
 
385 aa  231  1e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2175  acyl-CoA dehydrogenase domain-containing protein  38.01 
 
 
401 aa  228  1e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5570  acyl-CoA dehydrogenase domain-containing protein  37.36 
 
 
385 aa  224  2e-57  Mycobacterium sp. JLS  Bacteria  normal  0.0891076  normal 
 
 
-
 
NC_008146  Mmcs_5189  acyl-CoA dehydrogenase-like protein  37.36 
 
 
385 aa  224  2e-57  Mycobacterium sp. MCS  Bacteria  normal  0.454654  n/a   
 
 
-
 
NC_008705  Mkms_5278  acyl-CoA dehydrogenase domain-containing protein  37.36 
 
 
385 aa  224  2e-57  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4583  acyl-CoA dehydrogenase domain-containing protein  38.61 
 
 
371 aa  221  1.9999999999999999e-56  Frankia sp. EAN1pec  Bacteria  normal  0.277909  normal  0.943502 
 
 
-
 
NC_007517  Gmet_2198  Acyl-CoA dehydrogenase-like  38.75 
 
 
378 aa  216  4e-55  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000106559  hitchhiker  0.00491627 
 
 
-
 
NC_013510  Tcur_1878  acyl-CoA dehydrogenase domain protein  40 
 
 
369 aa  214  2.9999999999999995e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0940842  n/a   
 
 
-
 
NC_009338  Mflv_0345  acyl-CoA dehydrogenase domain-containing protein  37.25 
 
 
389 aa  212  1e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1806  acyl-CoA dehydrogenase domain-containing protein  36.89 
 
 
361 aa  211  2e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.133917  normal 
 
 
-
 
NC_007778  RPB_4674  Acyl-CoA dehydrogenase-like  36.1 
 
 
379 aa  211  2e-53  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2335  acyl-CoA dehydrogenase domain-containing protein  38.37 
 
 
363 aa  211  2e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.607114 
 
 
-
 
NC_008048  Sala_1247  acyl-CoA dehydrogenase-like protein  35.56 
 
 
364 aa  211  2e-53  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.457334  normal 
 
 
-
 
NC_013441  Gbro_0926  acyl-CoA dehydrogenase domain protein  38.6 
 
 
373 aa  209  4e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2619  acyl-CoA dehydrogenase domain-containing protein  37.01 
 
 
366 aa  208  1e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0175274  normal  0.715708 
 
 
-
 
NC_009565  TBFG_11962  acyl-CoA dehydrogenase fadE18  36.39 
 
 
363 aa  208  2e-52  Mycobacterium tuberculosis F11  Bacteria  normal  0.618058  normal  0.535978 
 
 
-
 
NC_007953  Bxe_C0702  putative acyl-CoA dehydrogenase  36.73 
 
 
384 aa  207  3e-52  Burkholderia xenovorans LB400  Bacteria  normal  0.307402  normal  0.791276 
 
 
-
 
NC_011004  Rpal_5284  acyl-CoA dehydrogenase domain protein  37.17 
 
 
379 aa  207  3e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.245175  n/a   
 
 
-
 
NC_008726  Mvan_4007  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
365 aa  204  2e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4383  acyl-CoA dehydrogenase-like  35.83 
 
 
379 aa  202  8e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1445  acyl-CoA dehydrogenase domain-containing protein  36.59 
 
 
377 aa  199  5e-50  Caulobacter sp. K31  Bacteria  normal  0.837233  normal  0.259915 
 
 
-
 
NC_009719  Plav_2204  acyl-CoA dehydrogenase domain-containing protein  34.05 
 
 
379 aa  199  5e-50  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0189633  normal 
 
 
-
 
NC_013131  Caci_5360  acyl-CoA dehydrogenase domain protein  35.05 
 
 
373 aa  198  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1653  acyl-CoA dehydrogenase domain-containing protein  35.53 
 
 
379 aa  197  2.0000000000000003e-49  Maricaulis maris MCS10  Bacteria  normal  normal  0.257956 
 
 
-
 
NC_009921  Franean1_5602  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
416 aa  197  3e-49  Frankia sp. EAN1pec  Bacteria  normal  0.364458  hitchhiker  0.00573263 
 
 
-
 
NC_008048  Sala_1635  acyl-CoA dehydrogenase-like protein  38.93 
 
 
362 aa  196  4.0000000000000005e-49  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.787529  normal  0.547855 
 
 
-
 
NC_008726  Mvan_0393  acyl-CoA dehydrogenase domain-containing protein  36.29 
 
 
390 aa  196  4.0000000000000005e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0209729  normal  0.61958 
 
 
-
 
NC_009719  Plav_1873  acyl-CoA dehydrogenase domain-containing protein  36.31 
 
 
364 aa  196  6e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.25852 
 
 
-
 
NC_007974  Rmet_4575  acyl-CoA dehydrogenase-like protein  37.02 
 
 
379 aa  195  1e-48  Cupriavidus metallidurans CH34  Bacteria  normal  0.0903077  normal  0.010992 
 
 
-
 
NC_007333  Tfu_2310  putative acyl-CoA dehydrogenase  36.99 
 
 
377 aa  194  2e-48  Thermobifida fusca YX  Bacteria  normal  0.858496  n/a   
 
 
-
 
NC_009485  BBta_0703  putative acyl-CoA dehydrogenase  33.69 
 
 
379 aa  191  1e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2818  acyl-CoA dehydrogenase domain-containing protein  37.01 
 
 
390 aa  190  2.9999999999999997e-47  Salinispora arenicola CNS-205  Bacteria  normal  0.447416  hitchhiker  0.00100793 
 
 
-
 
NC_013159  Svir_16740  acyl-CoA dehydrogenase  35.87 
 
 
389 aa  191  2.9999999999999997e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3727  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
378 aa  190  2.9999999999999997e-47  Nocardioides sp. JS614  Bacteria  normal  0.0588386  n/a   
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  33.15 
 
 
377 aa  188  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010333  Caul_5299  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
362 aa  187  2e-46  Caulobacter sp. K31  Bacteria  normal  0.797236  normal  0.678656 
 
 
-
 
NC_009511  Swit_3632  acyl-CoA dehydrogenase domain-containing protein  34.7 
 
 
354 aa  186  6e-46  Sphingomonas wittichii RW1  Bacteria  normal  0.876605  normal  0.772709 
 
 
-
 
NC_013510  Tcur_2603  acyl-CoA dehydrogenase domain protein  38.4 
 
 
719 aa  186  6e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  0.035645  n/a   
 
 
-
 
NC_009077  Mjls_4134  acyl-CoA dehydrogenase domain-containing protein  34.73 
 
 
386 aa  186  7e-46  Mycobacterium sp. JLS  Bacteria  normal  normal  0.856762 
 
 
-
 
NC_007347  Reut_A0979  Acyl-CoA dehydrogenase, C-terminal  34.64 
 
 
372 aa  185  1.0000000000000001e-45  Ralstonia eutropha JMP134  Bacteria  normal  0.525022  n/a   
 
 
-
 
NC_010512  Bcenmc03_6833  acyl-CoA dehydrogenase domain-containing protein  32.04 
 
 
386 aa  184  2.0000000000000003e-45  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.508275  normal 
 
 
-
 
NC_008048  Sala_3078  acyl-CoA dehydrogenase-like protein  35.29 
 
 
372 aa  183  4.0000000000000006e-45  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1441  Acyl-CoA dehydrogenase-like  38.27 
 
 
412 aa  181  2e-44  Burkholderia sp. 383  Bacteria  normal  0.0998683  normal 
 
 
-
 
NC_009077  Mjls_5499  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
368 aa  178  2e-43  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7780  putative acyl-CoA dehydrogenase  32.13 
 
 
377 aa  178  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3728  putative acyl-CoA dehydrogenase  34.76 
 
 
381 aa  177  2e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5208  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
368 aa  178  2e-43  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1742  acyl-CoA dehydrogenase-like protein  33.69 
 
 
380 aa  177  2e-43  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5119  acyl-CoA dehydrogenase-like protein  35.23 
 
 
368 aa  178  2e-43  Mycobacterium sp. MCS  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_008705  Mkms_1789  acyl-CoA dehydrogenase domain-containing protein  33.69 
 
 
380 aa  177  2e-43  Mycobacterium sp. KMS  Bacteria  normal  0.662681  normal 
 
 
-
 
NC_013595  Sros_6824  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
326 aa  177  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.151954 
 
 
-
 
NC_013757  Gobs_2178  acyl-CoA dehydrogenase domain protein  35.44 
 
 
383 aa  177  3e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_009427  Saro_3761  acyl-CoA dehydrogenase domain-containing protein  31.82 
 
 
351 aa  177  4e-43  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.637859  n/a   
 
 
-
 
NC_009921  Franean1_3585  acyl-CoA dehydrogenase domain-containing protein  34.63 
 
 
396 aa  176  4e-43  Frankia sp. EAN1pec  Bacteria  normal  normal  0.399913 
 
 
-
 
NC_010002  Daci_5375  acyl-CoA dehydrogenase domain-containing protein  33.88 
 
 
371 aa  176  7e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.932772 
 
 
-
 
NC_007973  Rmet_0945  acyl-CoA dehydrogenase-like protein  33.61 
 
 
372 aa  176  8e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0689  acyl-CoA dehydrogenase domain protein  32.77 
 
 
370 aa  175  9.999999999999999e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1645  acyl-CoA dehydrogenase-like  33.87 
 
 
371 aa  174  1.9999999999999998e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.700839  n/a   
 
 
-
 
NC_009077  Mjls_1723  acyl-CoA dehydrogenase domain-containing protein  33.69 
 
 
380 aa  174  1.9999999999999998e-42  Mycobacterium sp. JLS  Bacteria  normal  0.0930374  normal 
 
 
-
 
NC_007925  RPC_2230  acyl-CoA dehydrogenase-like  33.87 
 
 
380 aa  174  2.9999999999999996e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0715641  normal  0.106969 
 
 
-
 
NC_013510  Tcur_1476  acyl-CoA dehydrogenase domain protein  35.05 
 
 
367 aa  173  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0077917  n/a   
 
 
-
 
NC_003295  RSc2044  putative acyl-CoA dehydrogenase oxidoreductase protein  32.9 
 
 
376 aa  173  5e-42  Ralstonia solanacearum GMI1000  Bacteria  normal  0.761176  normal  0.220022 
 
 
-
 
NC_010682  Rpic_2196  acyl-CoA dehydrogenase domain protein  33.79 
 
 
376 aa  172  6.999999999999999e-42  Ralstonia pickettii 12J  Bacteria  normal  normal  0.341698 
 
 
-
 
NC_011992  Dtpsy_2732  acyl-CoA dehydrogenase domain protein  34.76 
 
 
371 aa  172  7.999999999999999e-42  Acidovorax ebreus TPSY  Bacteria  normal  0.226148  n/a   
 
 
-
 
NC_007948  Bpro_3846  acyl-CoA dehydrogenase-like  34.13 
 
 
371 aa  172  7.999999999999999e-42  Polaromonas sp. JS666  Bacteria  normal  normal  0.94503 
 
 
-
 
NC_012791  Vapar_1273  acyl-CoA dehydrogenase domain protein  33.96 
 
 
371 aa  171  1e-41  Variovorax paradoxus S110  Bacteria  normal  0.592297  n/a   
 
 
-
 
NC_009338  Mflv_2286  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
368 aa  171  2e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.937022 
 
 
-
 
NC_008782  Ajs_3394  acyl-CoA dehydrogenase domain-containing protein  34.76 
 
 
371 aa  171  2e-41  Acidovorax sp. JS42  Bacteria  normal  normal  0.396655 
 
 
-
 
NC_008726  Mvan_4380  acyl-CoA dehydrogenase domain-containing protein  33.24 
 
 
371 aa  170  3e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4957  acyl-CoA dehydrogenase domain-containing protein  31.83 
 
 
378 aa  170  4e-41  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1873  acyl-CoA dehydrogenase domain protein  33.43 
 
 
376 aa  169  5e-41  Ralstonia pickettii 12D  Bacteria  normal  0.451558  normal  0.28146 
 
 
-
 
NC_007958  RPD_3549  acyl-CoA dehydrogenase-like  33.42 
 
 
380 aa  169  5e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3440  acyl-CoA dehydrogenase domain-containing protein  32.62 
 
 
371 aa  169  8e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.746544  normal  0.0926225 
 
 
-
 
NC_008699  Noca_4128  acyl-CoA dehydrogenase domain-containing protein  36.25 
 
 
352 aa  169  8e-41  Nocardioides sp. JS614  Bacteria  normal  0.430029  n/a   
 
 
-
 
NC_009077  Mjls_2573  acyl-CoA dehydrogenase domain-containing protein  37.32 
 
 
374 aa  169  1e-40  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4380  acyl-CoA dehydrogenase domain-containing protein  33.15 
 
 
380 aa  168  2e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.629178  normal 
 
 
-
 
NC_008781  Pnap_3225  acyl-CoA dehydrogenase domain-containing protein  33.69 
 
 
371 aa  167  2.9999999999999998e-40  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0961  acyl-CoA dehydrogenase domain protein  36.18 
 
 
352 aa  167  4e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.400614  normal 
 
 
-
 
NC_009921  Franean1_2718  acyl-CoA dehydrogenase domain-containing protein  33.06 
 
 
383 aa  166  4e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2697  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
384 aa  166  8e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.963882 
 
 
-
 
NC_007778  RPB_1750  Acyl-CoA dehydrogenase-like  32.88 
 
 
380 aa  166  9e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_014158  Tpau_3840  acyl-CoA dehydrogenase domain protein  36.07 
 
 
350 aa  165  1.0000000000000001e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13597  acyl-CoA dehydrogenase fadE33  34.38 
 
 
318 aa  165  1.0000000000000001e-39  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00991097  normal  0.383039 
 
 
-
 
NC_008726  Mvan_1964  acyl-CoA dehydrogenase domain-containing protein  32.88 
 
 
380 aa  165  1.0000000000000001e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_007951  Bxe_A3191  putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like  33.61 
 
 
375 aa  164  2.0000000000000002e-39  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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