Gene Noca_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3727 
Symbol 
ID4598589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3952892 
End bp3954028 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content75% 
IMG OID639778335 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_924914 
Protein GI119717949 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0588386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA CCTACGACGA CGAGCAGCAG GCCCTGCGCG AGGCCGTGCG CGGCCTGGTC 
GGCCGGACCT ACGCCGACTT CGAGAACCGC CGCCGGGCGG TGGCCGCGGA CCCCGGCTTC
AGCGAGGCCG TGTGGGGGCA GCTGGCCGAG ATGGGGATCC TCGGGCTCCC GTTCGCGGAG
GAGTACGGCG GGATGGGGGC CGGGGCCGTC GAGGTCGGCA TCGTCGCCCA GGAGCTGGGC
CGGGTGCTCG CTCCCGAGCC GTTCCTCACC GCCGTGGTGC TGGCCGGTGG CCTGGTCGCG
GAGGCCGGGT CGGAGGAGCA GCGCAACGAG CTGCTCGGCG GGCTGTCGGC CGGGGAGCTG
GTGCTCGCCT TCGCCCACGC CGAGCCCGGC TCGCGCTGGT CGCCGAGCGC CACGGAGGTC
CGCGCGGAGG CGGCCGGTGC CGGCTGGACG CTCAGCGGCG TGAAGGAGCC GGTGTCCCAC
GGGGCCCGCG CGGACGTGCT CGTCGTCAGC GCCGCGCTGC CCGGCGGCGG GACCGGGCTG
TTCGTGGTCG CCGGGGCGGA CGCCGTACGC GAGGGCTATC GGACCCACGA CGGCGGTCGA
GCCGCGCGTG TCGCCTTCGA CGGCACCGCG GCGACGCCGC TGGGGGCTGC CGAGGACCGC
ACCGGCATCA TCGCGCGGGT GCTCGACACC GCCCGGGTCG CCGCCTGCAA CGAGGCGGTG
GGGCTGATGG AGACCGCGCT CGACCTGACC TCGGCGTACC TCAAGAGCCG CAAGCAGTTC
GGCGTGACCC TCAACACCTT CCAGGCGCTC ACGTTCCGTG CCGCGGACTT GTACGTCTCG
CTCGAGCTGG CGCGCAGCAT GGCGCTGTGG GCGACGATGG TGCTCGACGG CGGGTCCGGG
GAGGAGACGT CGGTGGCGGC GTCGCGGGCG GCACTCCAGG TGAGCCGGGC CGGCCGGCAC
CTCGGGCAGG AGGCGATCCA GCTGCACGGC GGGATCGGCA TGACCGCGGA GTACAGCGTC
GGCAGCTACA CCAGCCGGCT CACCGCACTC GACCACCTGC TCGGCGACGG CAACCACCAC
CTGGGCCGGC TGGCCGCCGG CGTGCGCGGC TACGACGAGG TCGATCCGCT GCCGTGA
 
Protein sequence
MDFTYDDEQQ ALREAVRGLV GRTYADFENR RRAVAADPGF SEAVWGQLAE MGILGLPFAE 
EYGGMGAGAV EVGIVAQELG RVLAPEPFLT AVVLAGGLVA EAGSEEQRNE LLGGLSAGEL
VLAFAHAEPG SRWSPSATEV RAEAAGAGWT LSGVKEPVSH GARADVLVVS AALPGGGTGL
FVVAGADAVR EGYRTHDGGR AARVAFDGTA ATPLGAAEDR TGIIARVLDT ARVAACNEAV
GLMETALDLT SAYLKSRKQF GVTLNTFQAL TFRAADLYVS LELARSMALW ATMVLDGGSG
EETSVAASRA ALQVSRAGRH LGQEAIQLHG GIGMTAEYSV GSYTSRLTAL DHLLGDGNHH
LGRLAAGVRG YDEVDPLP