| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3606 |
|---|
| Symbol | |
|---|
| ID | 4024120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4017376 |
|---|
| End bp | 4018503 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637963810 |
|---|
| Product | acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_570730 |
|---|
| Protein GI | 91978071 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.343356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCG ATTTCTCCGA CGACCAGAAG CAACTGCGTG ATCAGGCGAG GCGGTTTCTC
GCCGAGAAGT GCCCGCCGAA GGCGGTGCGC GCCGTGCTCG AAGGCAAGGC GGATTACGAC
CGCGATCTCT GGAAGGGCCT CGCCGAAATG GGCTTTCTCG GCGTCGCGAT CCCCGAGGAA
TTCGGCGGCG CGGGCGCCGG CCATCTCGAA CTCTGCGTGA TCGCCGAAGA ACTCGGCCGC
GCGCTGGCGC CGGTGCCGTT CGCCTCGACC GTGTATCTCG CCGCCGAAGC GCTGCTGATC
GCGGGCTCCG ACGCGCAGAA GCAGACATGG TTGCCGAAGA TTTCTTCGGG CGAGGCGATC
GGCACGCTGG CGCTGTTCGA AGGCGCCGGC AATCCGTCGC CGCAGGCGAT CAAGGTCGCC
GCCAATGGCG GCACGATCAG CGGCGTCAAG AAGCCGGTCG CCGACGGCGC GATCGCCGAT
TTTGCGATCG TCGCAGCGCG CACCGGGACC AGCGGGCGTG AGACCGACAT CTCGCTGTTC
CTGGTCGATC TCAAGGCCGG CGGCGTCGAC GCCAAGGCGC TCGCGAGCGT CGATCCGTCG
CGGCAGCAGG CCGTGCTCAC CTTCAACGGC GCCAAGGCCG AGCCGCTCGG CGCCGCCAAT
GAAGGCTGGA GCATTCTGTC GCGCGTACTC GACCGCGCCG CGGTGCTGAT CGCGTTCGAA
CAGGTCGGCG GCTCCGACCG CGCGCTGGAG ATGGGCCGCG ACTACGCGCT CGACCGCATC
GCCTTCGGAC GGCCGATCGG CTCGTTCCAG GCCGTCAAGC ACATCCTCGC CGACATGTAC
GTCTCGGCGA CGCTGGCGCG CTCGAATTGC TATTACGGCG CCTGGGCGCT TTCAACCGAC
GCCGCCGAAC TGTCCGAGGC CGCCGCCGCG GCGCGGATCA GCGCCACGCA GGCGTTCCAG
CATTGCTCCA AGCAGAACAT CCAGGTCCAT GGCGGCATGG GCTTCACCTG GGAGTTCGAC
TGCCATCTGT ACTATCGCCG CTCCAACGCC CTGGCGCTGG CGCTCGGCAG CCAGTCGTAC
TGGGAGGATC AACTGATCGA CCGGATGCGC CAGAAGAACG CGGCGTGA
|
|---|
| Protein sequence | MNFDFSDDQK QLRDQARRFL AEKCPPKAVR AVLEGKADYD RDLWKGLAEM GFLGVAIPEE
FGGAGAGHLE LCVIAEELGR ALAPVPFAST VYLAAEALLI AGSDAQKQTW LPKISSGEAI
GTLALFEGAG NPSPQAIKVA ANGGTISGVK KPVADGAIAD FAIVAARTGT SGRETDISLF
LVDLKAGGVD AKALASVDPS RQQAVLTFNG AKAEPLGAAN EGWSILSRVL DRAAVLIAFE
QVGGSDRALE MGRDYALDRI AFGRPIGSFQ AVKHILADMY VSATLARSNC YYGAWALSTD
AAELSEAAAA ARISATQAFQ HCSKQNIQVH GGMGFTWEFD CHLYYRRSNA LALALGSQSY
WEDQLIDRMR QKNAA
|
|---|
| |